Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm28920-201ENSMUST00000189957 699 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm38075-201ENSMUST00000191979 920 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm19457-201ENSMUST00000200995 448 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm3442-201ENSMUST00000216808 710 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm14910-201ENSMUST00000121037 1805 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm37630-201ENSMUST00000194210 1456 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm37868-201ENSMUST00000195578 2735 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm22115-201ENSMUST00000103976 133 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm23923-201ENSMUST00000104108 133 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm11845-201ENSMUST00000117886 327 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm13076-201ENSMUST00000118041 204 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm13868-201ENSMUST00000122411 294 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm14129-201ENSMUST00000122436 291 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm23429-201ENSMUST00000122486 149 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm22841-201ENSMUST00000158443 62 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm17183-201ENSMUST00000171170 493 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Mir6541-201ENSMUST00000183649 110 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm27477-201ENSMUST00000184649 143 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim54Q9ERP3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm18296-201ENSMUST00000192475 783 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm36984-201ENSMUST00000192770 235 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm43541-201ENSMUST00000197208 581 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm44076-201ENSMUST00000203072 520 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm44475-201ENSMUST00000204041 424 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm44118-201ENSMUST00000204665 229 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm45080-201ENSMUST00000206648 283 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm19032-201ENSMUST00000208584 592 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 AC134334.1-201ENSMUST00000214277 255 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm9068-201ENSMUST00000217393 455 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 AC126673.2-201ENSMUST00000221052 686 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 AC147633.1-201ENSMUST00000225134 259 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 AC164883.9-201ENSMUST00000228042 399 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 AC155237.2-201ENSMUST00000228487 478 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 n-R5s37-201ENSMUST00000082533 118 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Trim54Q9ERP3 Gm45264-201ENSMUST00000210090 3995 ntBASIC4□□□□□ -1.77
Trim54Q9ERP3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim54Q9ERP3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm23326-201ENSMUST00000157419 105 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm23667-201ENSMUST00000157466 120 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm24438-201ENSMUST00000157893 115 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm25835-201ENSMUST00000158917 144 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm24315-201ENSMUST00000177835 127 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Mir6382-201ENSMUST00000184055 110 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm29452-201ENSMUST00000187996 313 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm28860-201ENSMUST00000188103 313 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm28314-201ENSMUST00000191276 345 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm37104-201ENSMUST00000193278 196 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm9722-201ENSMUST00000194568 802 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm32381-201ENSMUST00000203192 476 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm45023-201ENSMUST00000207951 379 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm18903-201ENSMUST00000215343 480 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 Gm2628-201ENSMUST00000218019 426 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.99□□□□□ -1.77
Trim54Q9ERP3 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms