Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Mir804-201ENSMUST00000103251 95 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm22023-201ENSMUST00000104354 130 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm25560-201ENSMUST00000104606 176 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm11356-201ENSMUST00000118974 192 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm13080-201ENSMUST00000120556 420 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm14845-201ENSMUST00000121259 306 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm3470-201ENSMUST00000160819 420 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm3370-201ENSMUST00000171785 500 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm24082-201ENSMUST00000175175 83 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm25748-201ENSMUST00000175487 70 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm29492-201ENSMUST00000187124 457 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm28802-201ENSMUST00000188624 944 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm37104-201ENSMUST00000193278 196 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm44274-201ENSMUST00000203417 256 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.66□□□□□ -1.98
Lima1Q9ERG0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Lima1Q9ERG0 Mir542-201ENSMUST00000102186 85 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm12897-201ENSMUST00000120341 250 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm7308-201ENSMUST00000121087 447 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm14982-201ENSMUST00000121102 442 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm23887-201ENSMUST00000122683 172 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm23599-201ENSMUST00000157261 251 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm22885-201ENSMUST00000157410 107 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm18748-201ENSMUST00000198507 622 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm42818-201ENSMUST00000198869 987 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm18043-201ENSMUST00000216741 739 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm7422-201ENSMUST00000220115 640 ntBASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Lima1Q9ERG0 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm15161-201ENSMUST00000117340 387 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm15037-201ENSMUST00000120358 259 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm22794-201ENSMUST00000157228 306 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm24138-201ENSMUST00000157572 114 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm17166-201ENSMUST00000172006 431 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm20534-201ENSMUST00000172957 172 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm18415-201ENSMUST00000177464 647 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Mir7578-201ENSMUST00000183455 82 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm28358-202ENSMUST00000189292 223 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm24350-202ENSMUST00000198309 132 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm42593-201ENSMUST00000198469 377 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm44849-201ENSMUST00000207595 484 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm45409-201ENSMUST00000211486 252 ntBASIC2.64□□□□□ -1.99
Lima1Q9ERG0 Gm45860-201ENSMUST00000212700 334 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms