Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm14677-201ENSMUST00000117866 486 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm14971-201ENSMUST00000117980 663 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm15399-201ENSMUST00000118055 724 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm11414-201ENSMUST00000121795 263 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm23886-201ENSMUST00000122684 313 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm25373-201ENSMUST00000158156 115 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm27921-201ENSMUST00000183968 108 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Mir7081-201ENSMUST00000184490 75 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm27163-201ENSMUST00000184767 409 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm19891-201ENSMUST00000189771 303 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.81□□□□□ -1.96
Cdc40Q9DC48 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm25728-201ENSMUST00000104525 159 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm12954-201ENSMUST00000118610 611 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm14901-201ENSMUST00000119001 283 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm11252-201ENSMUST00000120572 939 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm11575-201ENSMUST00000122243 228 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm20651-201ENSMUST00000177219 329 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm26297-201ENSMUST00000179464 132 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm28113-201ENSMUST00000188280 229 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm29740-201ENSMUST00000193182 655 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm45192-201ENSMUST00000206749 283 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm45588-201ENSMUST00000211213 630 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm23738-201ENSMUST00000082828 171 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.8□□□□□ -1.96
Cdc40Q9DC48 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm23380-201ENSMUST00000158448 103 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm23415-201ENSMUST00000175519 83 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm22776-201ENSMUST00000178634 94 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm23767-201ENSMUST00000179278 94 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm26701-201ENSMUST00000181571 234 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm43096-201ENSMUST00000196173 421 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm18660-201ENSMUST00000199542 629 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm45400-201ENSMUST00000211603 653 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Cdc40Q9DC48 Gm6913-201ENSMUST00000100019 348 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm22187-201ENSMUST00000157819 129 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Nron-204ENSMUST00000158971 370 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm3025-201ENSMUST00000163454 489 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm2878-201ENSMUST00000170173 486 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm27698-201ENSMUST00000184060 249 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms