Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC147628.1-201ENSMUST00000228193 688 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm22974-201ENSMUST00000083301 103 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm23093-201ENSMUST00000083450 102 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm24067-201ENSMUST00000104514 85 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm15142-201ENSMUST00000121013 856 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm24898-201ENSMUST00000158133 106 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm22521-201ENSMUST00000158272 134 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm24811-201ENSMUST00000175313 100 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm22633-201ENSMUST00000179834 107 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm21070-201ENSMUST00000182425 985 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm18384-201ENSMUST00000195974 808 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm44041-201ENSMUST00000203678 396 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.35□□□□□ -1.71
Ddx56Q9D0R4 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm24469-201ENSMUST00000104487 131 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm14628-201ENSMUST00000117508 635 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm8666-201ENSMUST00000117517 292 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm12238-201ENSMUST00000127764 124 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm23068-201ENSMUST00000158239 293 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm18117-201ENSMUST00000187720 742 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm36964-201ENSMUST00000191876 198 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm44465-201ENSMUST00000199536 114 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm17887-201ENSMUST00000200194 547 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Gm19366-201ENSMUST00000206996 156 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ddx56Q9D0R4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ddx56Q9D0R4 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm12190-201ENSMUST00000120001 187 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm14392-201ENSMUST00000120332 401 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm14413-201ENSMUST00000122158 408 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Mir1947-201ENSMUST00000158235 85 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm24546-201ENSMUST00000158652 102 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm17186-201ENSMUST00000171742 456 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm27875-201ENSMUST00000184425 123 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm19641-201ENSMUST00000188432 417 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Gm46312-201ENSMUST00000220961 420 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Snord14e-201ENSMUST00000082857 90 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Mir452-201ENSMUST00000093629 85 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms