Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Gm24928-201ENSMUST00000083399 107 ntBASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Gm23096-201ENSMUST00000083447 107 ntBASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Gm25897-201ENSMUST00000083709 107 ntBASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Mrpl55Q9CZ83 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm13167-201ENSMUST00000118554 578 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm12897-201ENSMUST00000120341 250 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm11446-201ENSMUST00000121319 866 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm6762-201ENSMUST00000121769 289 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm1989-201ENSMUST00000126244 636 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm24813-201ENSMUST00000175310 84 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm21638-201ENSMUST00000179473 836 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm18486-201ENSMUST00000184040 298 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm27470-201ENSMUST00000184070 210 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm27715-201ENSMUST00000184714 260 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm7634-201ENSMUST00000185778 553 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm43142-201ENSMUST00000198670 361 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm43224-201ENSMUST00000201567 898 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm44016-201ENSMUST00000203463 164 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm44824-201ENSMUST00000207021 229 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm4921-201ENSMUST00000219804 992 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Mir101b-201ENSMUST00000083622 97 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Mrpl55Q9CZ83 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm22115-201ENSMUST00000103976 133 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm23923-201ENSMUST00000104108 133 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm26145-201ENSMUST00000104476 127 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm14681-201ENSMUST00000118047 411 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm22956-201ENSMUST00000122520 80 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm22034-201ENSMUST00000157283 134 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm25438-201ENSMUST00000158281 110 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Mir3112-201ENSMUST00000175431 82 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Mir6383-201ENSMUST00000184545 116 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm28650-201ENSMUST00000188413 411 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm21489-201ENSMUST00000189668 818 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm37288-201ENSMUST00000193963 334 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm43541-201ENSMUST00000197208 581 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm20177-201ENSMUST00000203705 334 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm45226-201ENSMUST00000206602 288 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm36776-201ENSMUST00000207006 203 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm18268-201ENSMUST00000208445 943 ntBASIC2.09□□□□□ -2.07
Mrpl55Q9CZ83 Gm35405-201ENSMUST00000218754 400 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms