Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm24150-201ENSMUST00000082759 104 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm13650-201ENSMUST00000117729 433 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm11352-201ENSMUST00000119264 517 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm13720-201ENSMUST00000120741 196 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm24745-201ENSMUST00000157840 85 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm26991-201ENSMUST00000180950 620 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm7909-201ENSMUST00000182688 614 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm37727-201ENSMUST00000191637 819 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm37001-201ENSMUST00000193377 190 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm43026-201ENSMUST00000202972 325 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm44720-201ENSMUST00000206076 260 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm45048-201ENSMUST00000207058 429 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm26206-201ENSMUST00000082908 110 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.38□□□□□ -1.87
Ddx28Q9CWT6 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm25765-201ENSMUST00000104100 132 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm12427-201ENSMUST00000117719 302 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm11600-201ENSMUST00000119592 240 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm11982-201ENSMUST00000121480 314 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm26276-201ENSMUST00000157099 109 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm23123-201ENSMUST00000157648 144 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm23782-201ENSMUST00000157939 120 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm24727-201ENSMUST00000158231 144 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm23619-201ENSMUST00000178411 94 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm25474-201ENSMUST00000179052 94 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm22047-201ENSMUST00000179176 94 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm26701-201ENSMUST00000181571 234 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm28146-201ENSMUST00000185517 701 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm28474-201ENSMUST00000188501 315 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm37791-201ENSMUST00000195081 286 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm45192-201ENSMUST00000206749 283 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.37□□□□□ -1.87
Ddx28Q9CWT6 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm23577-201ENSMUST00000103950 110 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm24792-201ENSMUST00000104286 128 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm14835-201ENSMUST00000119039 315 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm13482-201ENSMUST00000119842 254 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm12045-201ENSMUST00000122122 573 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm22986-201ENSMUST00000122753 130 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm22036-201ENSMUST00000157279 215 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gm24190-201ENSMUST00000157976 216 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Mir6907-201ENSMUST00000183764 71 ntBASIC3.36□□□□□ -1.87
Ddx28Q9CWT6 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms