Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm25213-201ENSMUST00000102388 113 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm11829-201ENSMUST00000121003 282 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm14581-201ENSMUST00000121726 198 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm6762-201ENSMUST00000121769 289 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm8840-201ENSMUST00000122454 386 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm44208-201ENSMUST00000205199 421 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm18252-203ENSMUST00000215855 757 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm24147-201ENSMUST00000082763 144 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc43Q9CR29 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm25764-201ENSMUST00000104092 134 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm22026-201ENSMUST00000122735 281 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm25835-201ENSMUST00000158917 144 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm20415-201ENSMUST00000172877 423 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Mir6975-201ENSMUST00000184879 61 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm6012-201ENSMUST00000210821 730 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm24622-201ENSMUST00000082619 162 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.56□□□□□ -1.84
Ccdc43Q9CR29 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm26423-201ENSMUST00000104277 128 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm11490-201ENSMUST00000118128 272 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm15103-201ENSMUST00000119893 871 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm12755-201ENSMUST00000122297 282 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm25979-201ENSMUST00000157177 138 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm29045-201ENSMUST00000187278 698 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm28650-201ENSMUST00000188413 411 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm37281-201ENSMUST00000192412 439 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm17893-201ENSMUST00000203017 770 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm44084-201ENSMUST00000203947 409 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm18597-201ENSMUST00000209519 694 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm45420-201ENSMUST00000211243 425 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Snora7a-201ENSMUST00000082629 140 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.55□□□□□ -1.84
Ccdc43Q9CR29 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm24581-201ENSMUST00000103962 133 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm15282-201ENSMUST00000117707 300 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm11356-201ENSMUST00000118974 192 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Gm14739-201ENSMUST00000120424 802 ntBASIC3.54□□□□□ -1.84
Ccdc43Q9CR29 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms