Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm13967-201ENSMUST00000120404 380 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm11384-201ENSMUST00000121376 303 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm23752-201ENSMUST00000157584 115 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Zakit-201ENSMUST00000157677 308 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm23662-201ENSMUST00000158046 111 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm6374-201ENSMUST00000159051 788 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm24761-201ENSMUST00000179589 127 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm24488-201ENSMUST00000179934 127 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm25701-201ENSMUST00000179988 127 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm26431-201ENSMUST00000180199 127 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Mir8106-201ENSMUST00000184520 139 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm8296-201ENSMUST00000185597 524 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm29484-201ENSMUST00000186067 324 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm37881-201ENSMUST00000193001 421 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm44881-201ENSMUST00000205425 367 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm22358-201ENSMUST00000082877 122 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm26497-201ENSMUST00000083146 107 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Mir338-201ENSMUST00000083666 98 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Gm25188-201ENSMUST00000083913 122 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Rpa1Q8VEE4 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm24371-201ENSMUST00000122662 267 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm25606-201ENSMUST00000158363 95 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm16557-201ENSMUST00000159182 191 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm25939-201ENSMUST00000179876 191 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Mir6338-201ENSMUST00000183389 109 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm27528-201ENSMUST00000183544 205 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm19427-201ENSMUST00000183619 208 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm2914-201ENSMUST00000186120 328 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm18384-201ENSMUST00000195974 808 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm25203-202ENSMUST00000200458 216 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm4321-201ENSMUST00000200520 442 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm34091-201ENSMUST00000200875 604 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm44871-201ENSMUST00000207821 497 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm25203-201ENSMUST00000082842 215 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm25260-201ENSMUST00000083053 134 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm26329-201ENSMUST00000093723 110 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm8074-201ENSMUST00000095071 252 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rpa1Q8VEE4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm25152-201ENSMUST00000157117 114 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm26320-201ENSMUST00000157742 306 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm27510-201ENSMUST00000158214 64 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm22113-201ENSMUST00000158343 104 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm23921-201ENSMUST00000175258 107 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm23415-201ENSMUST00000175519 83 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm29262-201ENSMUST00000190084 196 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm38015-201ENSMUST00000193048 188 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm42570-201ENSMUST00000195937 292 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm42647-201ENSMUST00000195939 459 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm43855-201ENSMUST00000197462 507 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Mir219c-201ENSMUST00000199860 60 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm44844-201ENSMUST00000207242 336 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 Gm45434-201ENSMUST00000210550 293 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.06□□□□□ -1.6
Rpa1Q8VEE4 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms