Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm24281-201ENSMUST00000104234 136 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm14875-201ENSMUST00000120881 319 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm23206-201ENSMUST00000122720 184 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Mir1251-201ENSMUST00000175486 84 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm20673-201ENSMUST00000177167 430 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm27190-201ENSMUST00000184890 542 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm37433-201ENSMUST00000192695 678 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm38329-201ENSMUST00000193473 427 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm37441-201ENSMUST00000194430 678 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm44076-201ENSMUST00000203072 520 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm18903-201ENSMUST00000215343 480 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm9309-201ENSMUST00000223537 546 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Gm7984-201ENSMUST00000060640 538 ntBASIC4.05□□□□□ -1.76
CopaQ8CIE6 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CopaQ8CIE6 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Mir669l-201ENSMUST00000103771 98 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm25420-201ENSMUST00000104216 127 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm24792-201ENSMUST00000104286 128 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm13804-201ENSMUST00000119552 172 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm6584-201ENSMUST00000119671 447 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm14159-201ENSMUST00000119832 451 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm22755-201ENSMUST00000157143 100 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm23231-201ENSMUST00000157299 104 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm7909-201ENSMUST00000182688 614 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm27760-201ENSMUST00000185048 114 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm28920-201ENSMUST00000189957 699 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm37869-201ENSMUST00000193385 595 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm37119-201ENSMUST00000195691 389 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm43804-201ENSMUST00000198280 456 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.04□□□□□ -1.76
CopaQ8CIE6 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CopaQ8CIE6 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm14816-201ENSMUST00000117174 294 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm14282-201ENSMUST00000119484 240 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm8757-201ENSMUST00000119660 372 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm15244-201ENSMUST00000121122 130 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm11430-201ENSMUST00000121317 217 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm11834-201ENSMUST00000122257 585 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm11281-201ENSMUST00000141391 576 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm23098-201ENSMUST00000157552 299 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Mir3964-201ENSMUST00000174898 74 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm4076-201ENSMUST00000179230 965 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm27308-201ENSMUST00000184807 233 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm9722-201ENSMUST00000194568 802 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm8023-201ENSMUST00000195298 903 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.03□□□□□ -1.76
CopaQ8CIE6 Gm44274-201ENSMUST00000203417 256 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms