Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc28bQ8CEG5 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm24430-201ENSMUST00000104077 104 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm15113-201ENSMUST00000119280 836 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm16017-201ENSMUST00000119834 208 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm15014-201ENSMUST00000120742 258 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm4852-201ENSMUST00000121202 729 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm16290-201ENSMUST00000161175 474 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Mir3062-201ENSMUST00000174986 105 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Mir7020-201ENSMUST00000183787 70 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm17929-201ENSMUST00000186851 627 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm29184-201ENSMUST00000190038 334 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm8242-202ENSMUST00000193056 475 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm37550-201ENSMUST00000193230 463 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm42465-201ENSMUST00000197036 492 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm3010-201ENSMUST00000198805 448 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm43441-201ENSMUST00000201458 205 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm17991-201ENSMUST00000208139 297 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm7380-201ENSMUST00000211599 466 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm45439-201ENSMUST00000211723 359 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm22265-201ENSMUST00000082947 116 ntBASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc28bQ8CEG5 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm24469-201ENSMUST00000104487 131 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm12568-201ENSMUST00000117362 624 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14358-201ENSMUST00000118458 403 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14877-201ENSMUST00000119803 478 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm11359-201ENSMUST00000120039 567 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14903-201ENSMUST00000122435 537 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm25555-201ENSMUST00000158078 111 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm10075-201ENSMUST00000162030 545 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm27919-201ENSMUST00000185163 107 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm37791-201ENSMUST00000195081 286 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm5552-201ENSMUST00000197149 515 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm43559-201ENSMUST00000198755 466 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm7726-201ENSMUST00000206241 231 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm45742-201ENSMUST00000212400 433 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm29884-201ENSMUST00000218403 453 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm23733-201ENSMUST00000083750 106 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm11253-201ENSMUST00000118486 201 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14517-201ENSMUST00000119040 337 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14731-201ENSMUST00000119216 376 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm14804-201ENSMUST00000122322 508 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm25807-201ENSMUST00000122783 305 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm24438-201ENSMUST00000157893 115 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Mir1947-201ENSMUST00000158235 85 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm24498-201ENSMUST00000158445 102 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm24819-201ENSMUST00000175094 166 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm26968-201ENSMUST00000182894 481 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm10292-201ENSMUST00000183142 581 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Mir6405-201ENSMUST00000184584 124 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm45192-201ENSMUST00000206749 283 ntBASIC3.29□□□□□ -1.88
Ccdc28bQ8CEG5 Gm45146-201ENSMUST00000207108 221 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms