Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mir682-201ENSMUST00000102281 96 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm23747-201ENSMUST00000104228 131 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm14982-201ENSMUST00000121102 442 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm13131-201ENSMUST00000122228 321 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm23792-201ENSMUST00000122557 93 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm25598-201ENSMUST00000179031 107 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.57□□□□□ -2
Trub1Q8C0D0 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm43489-201ENSMUST00000196810 993 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm44519-201ENSMUST00000206486 122 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Mir193a-201ENSMUST00000083461 66 ntBASIC2.57□□□□□ -2
Trub1Q8C0D0 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm15108-201ENSMUST00000116160 803 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm15111-201ENSMUST00000122142 878 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm15530-201ENSMUST00000122206 555 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Mir7013-201ENSMUST00000183540 72 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Mir6353-201ENSMUST00000183596 113 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm28282-201ENSMUST00000186072 186 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm45452-201ENSMUST00000210905 177 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm8031-201ENSMUST00000213430 626 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trub1Q8C0D0 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trub1Q8C0D0 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm24611-201ENSMUST00000083272 107 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.56□□□□□ -2
Trub1Q8C0D0 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trub1Q8C0D0 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm23175-201ENSMUST00000104371 132 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm6574-201ENSMUST00000120037 362 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm12001-201ENSMUST00000121727 913 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm11344-201ENSMUST00000122011 335 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm26041-201ENSMUST00000158148 108 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm4540-201ENSMUST00000170669 429 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm7909-201ENSMUST00000182688 614 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.55□□□□□ -2
Trub1Q8C0D0 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.55□□□□□ -2
Trub1Q8C0D0 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm42593-201ENSMUST00000198469 377 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm42818-201ENSMUST00000198869 987 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm45078-201ENSMUST00000205343 546 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm44718-201ENSMUST00000206886 359 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm6112-201ENSMUST00000208037 629 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.55□□□□□ -2
Trub1Q8C0D0 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trub1Q8C0D0 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm14579-201ENSMUST00000117068 283 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm15282-201ENSMUST00000117707 300 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm14159-201ENSMUST00000119832 451 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm13080-201ENSMUST00000120556 420 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm13862-201ENSMUST00000121220 197 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm12617-201ENSMUST00000121268 381 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm11797-201ENSMUST00000121336 754 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm16363-201ENSMUST00000132460 877 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm23167-201ENSMUST00000157155 103 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Mir1264-201ENSMUST00000175381 86 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Mir6386-201ENSMUST00000183558 104 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm43669-201ENSMUST00000198229 436 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.54□□□□□ -2
Trub1Q8C0D0 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms