Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.21□□□□□ -1.9
Usp47Q8BY87 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.21□□□□□ -1.9
Usp47Q8BY87 Gm43587-201ENSMUST00000199590 204 ntBASIC3.21□□□□□ -1.9
Usp47Q8BY87 Gm44212-201ENSMUST00000205016 897 ntBASIC3.21□□□□□ -1.9
Usp47Q8BY87 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.21□□□□□ -1.9
Usp47Q8BY87 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.21□□□□□ -1.9
Usp47Q8BY87 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.21□□□□□ -1.9
Usp47Q8BY87 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Usp47Q8BY87 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usp47Q8BY87 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Usp47Q8BY87 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp47Q8BY87 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Gm12294-201ENSMUST00000119723 490 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Gm14939-201ENSMUST00000120347 680 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Gm5309-201ENSMUST00000197416 677 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp47Q8BY87 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.2□□□□□ -1.9
Usp47Q8BY87 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usp47Q8BY87 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usp47Q8BY87 Mir322-201ENSMUST00000083484 95 ntBASIC3.2□□□□□ -1.9
Usp47Q8BY87 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usp47Q8BY87 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.2□□□□□ -1.9
Usp47Q8BY87 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usp47Q8BY87 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm15074-201ENSMUST00000117603 936 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm15936-201ENSMUST00000118706 460 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm13588-201ENSMUST00000120026 135 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm11404-201ENSMUST00000120872 494 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm22416-201ENSMUST00000158590 88 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm25119-201ENSMUST00000158815 88 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Mir6406-201ENSMUST00000183592 120 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Gm19280-201ENSMUST00000190191 205 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC3.19□□□□□ -1.9
Usp47Q8BY87 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm25377-201ENSMUST00000104334 129 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm4910-201ENSMUST00000119605 366 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm16490-201ENSMUST00000165299 351 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm19599-201ENSMUST00000218898 358 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usp47Q8BY87 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm9818-201ENSMUST00000050900 255 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Gm22245-201ENSMUST00000082479 103 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.18□□□□□ -1.9
Usp47Q8BY87 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp47Q8BY87 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Usp47Q8BY87 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Usp47Q8BY87 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm12871-201ENSMUST00000118758 438 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm12880-201ENSMUST00000120652 494 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm14982-201ENSMUST00000121102 442 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm13460-201ENSMUST00000121274 353 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm23716-201ENSMUST00000157348 144 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm22517-201ENSMUST00000158265 136 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm23005-201ENSMUST00000158950 136 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Usp47Q8BY87 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm2544-201ENSMUST00000222702 756 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.17□□□□□ -1.9
Usp47Q8BY87 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Usp47Q8BY87 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Usp47Q8BY87 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Usp47Q8BY87 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm23950-201ENSMUST00000104026 129 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usp47Q8BY87 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm13439-201ENSMUST00000117541 409 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm12230-201ENSMUST00000118301 454 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm7846-201ENSMUST00000145844 274 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm23548-201ENSMUST00000158963 106 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm9174-201ENSMUST00000078149 255 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm24917-201ENSMUST00000083935 104 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Usp47Q8BY87 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.16□□□□□ -1.9
Usp47Q8BY87 Gm15019-201ENSMUST00000120148 434 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm13555-201ENSMUST00000121668 319 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm14905-201ENSMUST00000122351 639 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm23642-201ENSMUST00000157858 258 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm22803-201ENSMUST00000158049 283 ntBASIC3.15□□□□□ -1.9
Usp47Q8BY87 Gm23116-201ENSMUST00000158481 67 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms