Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.4□□□□□ -1.55
Usp40Q8BWR4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm15268-201ENSMUST00000118845 352 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm14731-201ENSMUST00000119216 376 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm14534-201ENSMUST00000120045 357 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 n-R5s68-201ENSMUST00000122639 82 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm22791-201ENSMUST00000157232 145 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm23124-201ENSMUST00000157650 107 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm27392-201ENSMUST00000185041 101 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm43070-201ENSMUST00000196938 415 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm31849-201ENSMUST00000220306 375 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Gm3829-201ENSMUST00000222362 619 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Snord68-201ENSMUST00000082516 86 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Mir323-201ENSMUST00000083683 86 ntBASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Usp40Q8BWR4 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm25727-201ENSMUST00000104522 131 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm11898-201ENSMUST00000117161 385 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm11829-201ENSMUST00000121003 282 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm23118-201ENSMUST00000122657 187 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm22792-201ENSMUST00000157225 133 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm23781-201ENSMUST00000157940 308 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm24584-201ENSMUST00000157972 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm25334-201ENSMUST00000158036 110 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm22085-201ENSMUST00000158344 110 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm25748-201ENSMUST00000175487 70 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm22286-201ENSMUST00000179708 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Mir7658-201ENSMUST00000184043 57 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm29668-201ENSMUST00000187802 315 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 n-TSaga9-201ENSMUST00000197675 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm45742-201ENSMUST00000212400 433 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm18696-201ENSMUST00000220103 274 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm22749-201ENSMUST00000082490 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm24856-201ENSMUST00000082809 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm25258-201ENSMUST00000083049 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm24535-201ENSMUST00000083140 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm22352-201ENSMUST00000083917 107 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Usp40Q8BWR4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm37655-201ENSMUST00000193968 4123 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm24403-201ENSMUST00000104616 130 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm14517-201ENSMUST00000119040 337 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm15106-201ENSMUST00000119691 821 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm21999-201ENSMUST00000165985 387 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Mir7047-201ENSMUST00000184595 64 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm43083-201ENSMUST00000199594 476 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm42475-201ENSMUST00000201212 295 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 Gm44294-201ENSMUST00000205090 728 ntBASIC5.37□□□□□ -1.55
Usp40Q8BWR4 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms