Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm15773-201ENSMUST00000118665 1448 ntBASIC1.87□□□□□ -2.11
Ttc28Q80XJ3 Gm7485-201ENSMUST00000119502 1109 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm14065-201ENSMUST00000120848 585 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm24010-201ENSMUST00000157731 282 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm25161-201ENSMUST00000158913 132 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Mir3073b-201ENSMUST00000199383 60 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm23447-201ENSMUST00000082798 163 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm7709-201ENSMUST00000199391 1858 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm23109-201ENSMUST00000116867 126 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm14957-201ENSMUST00000121069 817 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm25470-201ENSMUST00000175576 111 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Mir142-201ENSMUST00000198092 64 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 AC160550.3-201ENSMUST00000226818 400 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Gm43780-201ENSMUST00000196510 3600 ntBASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ttc28Q80XJ3 Snord71-201ENSMUST00000104361 85 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm8430-201ENSMUST00000119780 471 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm11430-201ENSMUST00000121317 217 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm16328-201ENSMUST00000126985 196 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Mir7059-201ENSMUST00000184825 59 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm17946-201ENSMUST00000186856 538 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm6501-201ENSMUST00000187178 916 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm22683-201ENSMUST00000082854 137 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm25628-201ENSMUST00000084002 105 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm44789-201ENSMUST00000207195 3101 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm37788-201ENSMUST00000193958 2705 ntBASIC1.85□□□□□ -2.11
Ttc28Q80XJ3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ttc28Q80XJ3 Gm24288-201ENSMUST00000157630 144 ntBASIC1.84□□□□□ -2.11
Ttc28Q80XJ3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ttc28Q80XJ3 Gm28975-201ENSMUST00000186412 686 ntBASIC1.84□□□□□ -2.11
Ttc28Q80XJ3 Gm42818-201ENSMUST00000198869 987 ntBASIC1.84□□□□□ -2.11
Ttc28Q80XJ3 Gm4263-202ENSMUST00000221392 667 ntBASIC1.84□□□□□ -2.11
Ttc28Q80XJ3 Gm6923-201ENSMUST00000118343 406 ntBASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Gm16318-201ENSMUST00000162402 601 ntBASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Olfr203-201ENSMUST00000089305 924 ntBASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Gm5670-201ENSMUST00000093546 372 ntBASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Gm20345-201ENSMUST00000175839 2414 ntBASIC1.84□□□□□ -2.12
Ttc28Q80XJ3 Mir301b-201ENSMUST00000102333 97 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm26301-201ENSMUST00000104813 95 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm44370-201ENSMUST00000175436 112 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm22852-201ENSMUST00000177899 101 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Mir6352-201ENSMUST00000184495 116 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm44938-201ENSMUST00000208614 427 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 AC118639.1-201ENSMUST00000227204 338 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm42484-201ENSMUST00000196075 2104 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm15846-201ENSMUST00000116022 320 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm22806-201ENSMUST00000082738 136 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
Ttc28Q80XJ3 Gm12706-201ENSMUST00000121588 698 ntBASIC1.82□□□□□ -2.12
Ttc28Q80XJ3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.82□□□□□ -2.12
Ttc28Q80XJ3 Gm22378-201ENSMUST00000157481 111 ntBASIC1.82□□□□□ -2.12
Ttc28Q80XJ3 Gm25976-201ENSMUST00000158695 130 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms