Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm24831-201ENSMUST00000116778 126 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm12982-201ENSMUST00000117408 190 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm14714-201ENSMUST00000119743 439 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm12640-201ENSMUST00000120097 310 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm14804-201ENSMUST00000122322 508 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm22107-201ENSMUST00000122548 100 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm25292-201ENSMUST00000122797 322 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm24439-201ENSMUST00000157894 117 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm25224-201ENSMUST00000158195 68 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm10067-201ENSMUST00000179462 348 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm21726-201ENSMUST00000179654 392 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm27760-201ENSMUST00000185048 114 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm28098-201ENSMUST00000191361 699 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm36953-201ENSMUST00000195295 268 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm42453-201ENSMUST00000200477 409 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm44521-201ENSMUST00000206469 217 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm18507-201ENSMUST00000218855 525 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm8785-201ENSMUST00000220259 487 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Ear14-201ENSMUST00000049559 468 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm23645-201ENSMUST00000083228 108 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Mir132-201ENSMUST00000083603 66 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Ubfd1Q78JW9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.9□□□□□ -1.78
Ubfd1Q78JW9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ubfd1Q78JW9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Ubfd1Q78JW9 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ubfd1Q78JW9 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ubfd1Q78JW9 Gm23133-201ENSMUST00000104255 135 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm15364-201ENSMUST00000119618 585 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm23782-201ENSMUST00000157939 120 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm17119-201ENSMUST00000163943 280 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm24713-201ENSMUST00000178850 107 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm25448-201ENSMUST00000180065 107 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm7909-201ENSMUST00000182688 614 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm37791-201ENSMUST00000195081 286 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm43028-201ENSMUST00000202561 481 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm35876-201ENSMUST00000205044 459 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm45796-201ENSMUST00000212483 114 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm25755-201ENSMUST00000083396 107 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ubfd1Q78JW9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Mir294-201ENSMUST00000104710 84 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm12156-201ENSMUST00000119188 554 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm11693-201ENSMUST00000119625 565 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm11645-201ENSMUST00000121589 649 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm11931-201ENSMUST00000121630 447 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm14530-201ENSMUST00000122391 333 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm12226-201ENSMUST00000144172 876 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm24784-201ENSMUST00000157640 62 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.89□□□□□ -1.79
Ubfd1Q78JW9 Gm22120-201ENSMUST00000175590 70 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms