Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm25421-201ENSMUST00000104218 164 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Gm15760-201ENSMUST00000119553 283 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Gm15157-201ENSMUST00000121852 702 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Gm7592-201ENSMUST00000160674 627 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Gm43626-201ENSMUST00000198575 162 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Topbp1Q6ZQF0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gm13440-201ENSMUST00000121665 496 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gm16569-201ENSMUST00000160526 314 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gm37550-201ENSMUST00000193230 463 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gm7214-201ENSMUST00000222428 272 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 Gm23623-201ENSMUST00000082461 107 ntBASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Topbp1Q6ZQF0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Mir466i-201ENSMUST00000116924 121 ntBASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Gm26345-201ENSMUST00000157534 120 ntBASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Gm22159-201ENSMUST00000158412 130 ntBASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Gm2389-201ENSMUST00000160487 189 ntBASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Topbp1Q6ZQF0 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Gm14652-201ENSMUST00000118479 235 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Mir3106-201ENSMUST00000175401 82 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Mir7679-201ENSMUST00000183379 63 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Gm26922-201ENSMUST00000082687 72 ntBASIC3.09□□□□□ -1.92
Topbp1Q6ZQF0 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm23109-201ENSMUST00000116867 126 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm13771-201ENSMUST00000117988 238 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm11876-201ENSMUST00000120002 269 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm15244-201ENSMUST00000121122 130 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm24379-201ENSMUST00000122695 86 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm23179-201ENSMUST00000158693 304 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm8224-201ENSMUST00000166178 497 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm2142-201ENSMUST00000197899 589 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm43440-201ENSMUST00000201957 729 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Gm5175-202ENSMUST00000219699 529 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.08□□□□□ -1.92
Topbp1Q6ZQF0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Gm12935-201ENSMUST00000119352 246 ntBASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Gm29534-201ENSMUST00000187328 382 ntBASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Gm2691-201ENSMUST00000203205 901 ntBASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Topbp1Q6ZQF0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Gm8338-201ENSMUST00000163928 363 ntBASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Gm4263-202ENSMUST00000221392 667 ntBASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Topbp1Q6ZQF0 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm16328-201ENSMUST00000126985 196 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm29657-201ENSMUST00000189807 342 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm24207-201ENSMUST00000082781 108 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm23677-201ENSMUST00000083156 104 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Topbp1Q6ZQF0 Gm22713-201ENSMUST00000116895 130 ntBASIC3.04□□□□□ -1.92
Topbp1Q6ZQF0 Gm27580-201ENSMUST00000183666 149 ntBASIC3.04□□□□□ -1.92
Topbp1Q6ZQF0 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms