Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Gm24950-201ENSMUST00000082768 191 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Snord35b-201ENSMUST00000082833 87 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Gm25792-201ENSMUST00000083289 100 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Gm23971-201ENSMUST00000083317 191 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Gm23849-201ENSMUST00000083833 191 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Gm26316-201ENSMUST00000083886 191 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx58Q6Q899 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ddx58Q6Q899 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm22115-201ENSMUST00000103976 133 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm23923-201ENSMUST00000104108 133 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Mir294-201ENSMUST00000104710 84 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm24831-201ENSMUST00000116778 126 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm13349-201ENSMUST00000118436 411 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm13720-201ENSMUST00000120741 196 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm14875-201ENSMUST00000120881 319 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm22988-201ENSMUST00000122759 144 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm22561-201ENSMUST00000157331 84 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm7909-201ENSMUST00000182688 614 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm28591-201ENSMUST00000185259 183 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm28925-201ENSMUST00000188586 168 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm29641-201ENSMUST00000188955 259 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm36966-201ENSMUST00000192217 413 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm42465-201ENSMUST00000197036 492 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm44181-201ENSMUST00000203106 483 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm44927-201ENSMUST00000207573 716 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm44887-201ENSMUST00000208980 178 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Ddx58Q6Q899 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm24982-201ENSMUST00000104456 132 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm14825-201ENSMUST00000113538 701 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm12025-201ENSMUST00000117768 144 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm11352-201ENSMUST00000119264 517 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm22236-201ENSMUST00000157093 106 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm23538-201ENSMUST00000157535 101 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm23352-201ENSMUST00000158428 64 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm43026-201ENSMUST00000202972 325 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Gm4987-201ENSMUST00000078326 408 ntBASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx58Q6Q899 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ddx58Q6Q899 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.35□□□□□ -1.71
Ddx58Q6Q899 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms