Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm12640-201ENSMUST00000120097 310 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm14739-201ENSMUST00000120424 802 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm11260-201ENSMUST00000121163 942 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm13511-201ENSMUST00000121167 363 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm11891-201ENSMUST00000121241 619 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm11430-201ENSMUST00000121317 217 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm14129-201ENSMUST00000122436 291 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm25294-201ENSMUST00000122791 104 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm24244-201ENSMUST00000157317 130 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm22890-201ENSMUST00000158642 144 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm4761-201ENSMUST00000178086 582 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm19498-201ENSMUST00000191128 331 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm28314-201ENSMUST00000191276 345 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm37641-201ENSMUST00000193837 239 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm43039-201ENSMUST00000202883 963 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm45245-201ENSMUST00000210082 376 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm25205-201ENSMUST00000082841 103 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.05□□□□□ -1.76
Smarca1Q6PGB8 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm3563-201ENSMUST00000172963 1628 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm25272-201ENSMUST00000104293 128 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm12149-201ENSMUST00000117511 654 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm15988-201ENSMUST00000118677 367 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm14240-201ENSMUST00000120353 546 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm14101-201ENSMUST00000121502 473 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm29452-201ENSMUST00000187996 313 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm28860-201ENSMUST00000188103 313 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm43556-201ENSMUST00000196186 681 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Smarca1Q6PGB8 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm12118-201ENSMUST00000119766 532 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm6373-201ENSMUST00000121026 360 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm13419-201ENSMUST00000121711 271 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm25365-201ENSMUST00000158852 121 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm26460-201ENSMUST00000175061 126 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Snord92-201ENSMUST00000175548 85 ntBASIC4.03□□□□□ -1.76
Smarca1Q6PGB8 Gm27308-201ENSMUST00000184807 233 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms