Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm12568-201ENSMUST00000117362 624 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm12509-201ENSMUST00000118033 609 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm22988-201ENSMUST00000122759 144 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm24901-201ENSMUST00000158125 110 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm25653-201ENSMUST00000158473 138 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm22890-201ENSMUST00000158642 144 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm23312-201ENSMUST00000158774 102 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm25163-201ENSMUST00000158905 104 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm27903-201ENSMUST00000175482 126 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm29320-201ENSMUST00000185235 615 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm29179-202ENSMUST00000186138 615 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm29448-201ENSMUST00000186675 615 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm29314-201ENSMUST00000186800 615 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm28253-202ENSMUST00000187971 615 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm29169-201ENSMUST00000189835 615 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm42818-201ENSMUST00000198869 987 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm43026-201ENSMUST00000202972 325 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm44092-201ENSMUST00000204470 258 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm45023-201ENSMUST00000207951 379 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm7495-201ENSMUST00000215099 426 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm22423-201ENSMUST00000082861 184 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Olfr713-201ENSMUST00000098139 975 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm23987-201ENSMUST00000117039 129 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm15783-201ENSMUST00000117521 633 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm12268-201ENSMUST00000118398 442 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm14240-201ENSMUST00000120353 546 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm14926-201ENSMUST00000120650 508 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm13557-201ENSMUST00000120771 382 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm14366-201ENSMUST00000121970 730 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm23084-201ENSMUST00000157850 114 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm24314-201ENSMUST00000158274 123 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Mir6385-201ENSMUST00000184295 105 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm38109-201ENSMUST00000195386 181 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm43541-201ENSMUST00000197208 581 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm2676-201ENSMUST00000207279 606 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Snora7a-201ENSMUST00000082629 140 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm23503-201ENSMUST00000083903 107 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Usp49Q6P9L4 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Usp49Q6P9L4 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Usp49Q6P9L4 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Usp49Q6P9L4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm13454-201ENSMUST00000118166 483 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm6797-201ENSMUST00000119440 512 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm12897-201ENSMUST00000120341 250 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm28255-201ENSMUST00000187101 694 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm28151-201ENSMUST00000189404 951 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm28500-201ENSMUST00000190286 151 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm43578-201ENSMUST00000201250 459 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm6929-201ENSMUST00000210930 468 ntBASIC4.08□□□□□ -1.76
Usp49Q6P9L4 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms