Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm28749-209ENSMUST00000189599 614 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm29140-201ENSMUST00000190187 476 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm33163-201ENSMUST00000194504 614 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm44402-201ENSMUST00000203677 238 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm29781-201ENSMUST00000203862 478 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm35857-201ENSMUST00000212739 178 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm18016-201ENSMUST00000216119 801 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cpsf6Q6NVF9 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm13677-201ENSMUST00000120739 595 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm25654-201ENSMUST00000158467 88 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm8580-201ENSMUST00000160295 464 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm17065-201ENSMUST00000165245 239 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm17152-201ENSMUST00000172430 535 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm36954-201ENSMUST00000195362 363 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm34073-201ENSMUST00000195736 212 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm19126-201ENSMUST00000207896 509 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Gm6049-201ENSMUST00000222369 458 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cpsf6Q6NVF9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Mir599-201ENSMUST00000102378 88 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm26018-201ENSMUST00000104406 128 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm12495-201ENSMUST00000119750 447 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm22601-201ENSMUST00000157595 250 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm26354-201ENSMUST00000158221 129 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm22769-201ENSMUST00000158367 98 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm10075-201ENSMUST00000162030 545 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm7335-201ENSMUST00000172475 373 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm4617-201ENSMUST00000178993 331 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm37416-201ENSMUST00000193596 318 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm37801-201ENSMUST00000194754 274 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm3816-201ENSMUST00000209803 433 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm2059-201ENSMUST00000212025 287 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm25140-201ENSMUST00000083254 140 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm25755-201ENSMUST00000083396 107 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.56□□□□□ -1.68
Cpsf6Q6NVF9 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cpsf6Q6NVF9 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms