Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.02□□□□□ -1.77
CtcfQ61164 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CtcfQ61164 Gm24490-201ENSMUST00000083803 98 ntBASIC4.02□□□□□ -1.77
CtcfQ61164 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CtcfQ61164 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CtcfQ61164 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CtcfQ61164 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CtcfQ61164 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CtcfQ61164 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CtcfQ61164 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CtcfQ61164 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm23481-201ENSMUST00000104173 131 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm12739-201ENSMUST00000119769 382 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm11830-201ENSMUST00000120175 561 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm23591-201ENSMUST00000157663 286 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm25386-201ENSMUST00000157814 288 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm24739-201ENSMUST00000158855 292 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm7241-201ENSMUST00000159853 357 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm22307-201ENSMUST00000180019 107 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm38329-201ENSMUST00000193473 427 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm45316-201ENSMUST00000210128 162 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm45796-201ENSMUST00000212483 114 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.01□□□□□ -1.77
CtcfQ61164 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CtcfQ61164 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm24950-201ENSMUST00000082768 191 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm23971-201ENSMUST00000083317 191 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm23849-201ENSMUST00000083833 191 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Gm26316-201ENSMUST00000083886 191 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.01□□□□□ -1.77
CtcfQ61164 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CtcfQ61164 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC4.01□□□□□ -1.77
CtcfQ61164 Gm7133-201ENSMUST00000187797 2039 ntBASIC4□□□□□ -1.77
CtcfQ61164 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CtcfQ61164 Gm22269-201ENSMUST00000104002 130 ntBASIC4□□□□□ -1.77
CtcfQ61164 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4□□□□□ -1.77
CtcfQ61164 Gm13806-201ENSMUST00000117822 325 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm11600-201ENSMUST00000119592 240 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm16445-201ENSMUST00000120399 714 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm5646-201ENSMUST00000120568 714 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm13973-201ENSMUST00000121371 894 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm12819-201ENSMUST00000122223 629 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm22011-201ENSMUST00000158790 123 ntBASIC4□□□□□ -1.77
CtcfQ61164 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm20612-201ENSMUST00000176318 236 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm14527-201ENSMUST00000179300 639 ntBASIC4□□□□□ -1.77
CtcfQ61164 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4□□□□□ -1.77
CtcfQ61164 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4□□□□□ -1.77
CtcfQ61164 Gm43007-201ENSMUST00000197618 291 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm42828-201ENSMUST00000199669 469 ntBASIC4□□□□□ -1.77
CtcfQ61164 AC134334.1-201ENSMUST00000214277 255 ntBASIC4□□□□□ -1.77
CtcfQ61164 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC4□□□□□ -1.77
CtcfQ61164 Gm5175-202ENSMUST00000219699 529 ntBASIC4□□□□□ -1.77
CtcfQ61164 AC154552.4-201ENSMUST00000222171 151 ntBASIC4□□□□□ -1.77
CtcfQ61164 CT571268.1-201ENSMUST00000222320 407 ntBASIC4□□□□□ -1.77
CtcfQ61164 CT010506.3-201ENSMUST00000223699 410 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm12582-201ENSMUST00000030555 697 ntBASIC4□□□□□ -1.77
CtcfQ61164 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CtcfQ61164 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4□□□□□ -1.77
CtcfQ61164 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
CtcfQ61164 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4□□□□□ -1.77
CtcfQ61164 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4□□□□□ -1.77
CtcfQ61164 Gm22245-201ENSMUST00000082479 103 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm25581-201ENSMUST00000083410 164 ntBASIC4□□□□□ -1.77
CtcfQ61164 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4□□□□□ -1.77
CtcfQ61164 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4□□□□□ -1.77
CtcfQ61164 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CtcfQ61164 Gm42993-201ENSMUST00000196856 7325 ntBASIC4□□□□□ -1.77
CtcfQ61164 Gm336-201ENSMUST00000186376 1480 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CtcfQ61164 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CtcfQ61164 Gm11367-201ENSMUST00000117802 120 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm14627-201ENSMUST00000118931 567 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm7916-201ENSMUST00000120325 456 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm22199-201ENSMUST00000122660 126 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm22986-201ENSMUST00000122753 130 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.99□□□□□ -1.77
CtcfQ61164 Gm25667-201ENSMUST00000157701 275 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm28010-201ENSMUST00000179485 126 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.99□□□□□ -1.77
CtcfQ61164 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.99□□□□□ -1.77
CtcfQ61164 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CtcfQ61164 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CtcfQ61164 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm6240-201ENSMUST00000208014 473 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Gm7786-201ENSMUST00000210494 436 ntBASIC3.99□□□□□ -1.77
CtcfQ61164 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CtcfQ61164 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms