Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm42755-201ENSMUST00000198533 1493 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm26147-201ENSMUST00000104479 114 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm24831-201ENSMUST00000116778 126 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm13717-201ENSMUST00000119868 365 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm12779-201ENSMUST00000121496 143 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm22037-201ENSMUST00000157280 296 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm24191-201ENSMUST00000157977 122 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm26400-201ENSMUST00000175012 85 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm28097-201ENSMUST00000187333 366 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm29192-201ENSMUST00000190942 377 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm37715-201ENSMUST00000193206 235 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm9318-201ENSMUST00000222444 438 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 CT010454.1-201ENSMUST00000225975 265 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm2710-201ENSMUST00000073196 603 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm25134-201ENSMUST00000082646 160 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Gm23302-201ENSMUST00000082710 100 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scaf1Q5U4C3 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm13518-201ENSMUST00000120018 233 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm26149-201ENSMUST00000157432 108 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm26490-201ENSMUST00000157879 140 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29512-201ENSMUST00000185544 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28110-201ENSMUST00000185782 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29062-201ENSMUST00000186032 694 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28838-201ENSMUST00000186338 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29057-201ENSMUST00000186468 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29661-201ENSMUST00000186781 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28737-201ENSMUST00000186808 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29118-201ENSMUST00000186908 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28433-201ENSMUST00000187085 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29635-201ENSMUST00000187221 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28759-201ENSMUST00000187621 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28831-201ENSMUST00000187739 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28200-201ENSMUST00000187778 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29026-201ENSMUST00000187787 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28752-201ENSMUST00000188340 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28797-201ENSMUST00000188543 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28855-201ENSMUST00000188680 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29378-201ENSMUST00000188723 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28569-201ENSMUST00000188748 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28120-201ENSMUST00000188812 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28369-201ENSMUST00000188993 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29037-201ENSMUST00000189092 313 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28909-201ENSMUST00000189406 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28705-201ENSMUST00000189548 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28861-201ENSMUST00000189681 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29180-201ENSMUST00000190003 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28939-201ENSMUST00000190351 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm28223-201ENSMUST00000190469 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29575-201ENSMUST00000190597 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29092-201ENSMUST00000190768 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm29469-201ENSMUST00000191448 315 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm44324-201ENSMUST00000198517 135 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Mir5121-201ENSMUST00000198528 74 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm34091-201ENSMUST00000200875 604 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm44419-201ENSMUST00000203338 229 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm8672-201ENSMUST00000221200 332 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 AC126440.1-201ENSMUST00000227098 349 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm8674-201ENSMUST00000179367 3047 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.49□□□□□ -1.37
Scaf1Q5U4C3 Gm43508-201ENSMUST00000197251 3783 ntBASIC6.48□□□□□ -1.37
Scaf1Q5U4C3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Scaf1Q5U4C3 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms