Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm25520-201ENSMUST00000158389 118 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm29576-201ENSMUST00000188020 678 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm28354-201ENSMUST00000190904 678 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm37431-201ENSMUST00000195102 111 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm42857-201ENSMUST00000200823 339 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm44404-201ENSMUST00000203979 636 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm46234-201ENSMUST00000218702 259 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm9973-202ENSMUST00000220926 166 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Mir323-201ENSMUST00000083683 86 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm21286-201ENSMUST00000098035 545 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim58Q5NCC9 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm12782-201ENSMUST00000117519 727 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm15110-201ENSMUST00000117545 881 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm16171-201ENSMUST00000118004 324 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm12268-201ENSMUST00000118398 442 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm13678-201ENSMUST00000118926 340 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm22330-201ENSMUST00000158068 115 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm3221-201ENSMUST00000164869 440 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm17166-201ENSMUST00000172006 431 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm28637-201ENSMUST00000179424 345 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm21489-201ENSMUST00000189668 818 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm29516-201ENSMUST00000190402 468 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm9632-201ENSMUST00000195934 643 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm18892-201ENSMUST00000217628 881 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm26458-201ENSMUST00000082832 128 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim58Q5NCC9 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm3940-201ENSMUST00000105087 432 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm14677-201ENSMUST00000117866 486 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm15951-201ENSMUST00000118377 400 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm9440-201ENSMUST00000119667 539 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm9001-201ENSMUST00000121642 399 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm14253-201ENSMUST00000122112 639 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm24681-201ENSMUST00000158760 107 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm4540-201ENSMUST00000170669 429 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm4479-201ENSMUST00000178807 171 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm7897-201ENSMUST00000193981 554 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm37576-201ENSMUST00000194228 372 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm44349-201ENSMUST00000197048 123 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm29920-201ENSMUST00000206876 754 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm18645-201ENSMUST00000209593 651 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms