Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm14253-201ENSMUST00000122112 639 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm25109-201ENSMUST00000122474 114 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm22107-201ENSMUST00000122548 100 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Usp28Q5I043 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm24879-201ENSMUST00000158386 143 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm17655-201ENSMUST00000167969 255 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm22776-201ENSMUST00000178634 94 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm22367-201ENSMUST00000178930 132 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm23767-201ENSMUST00000179278 94 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Mir7242-201ENSMUST00000183710 79 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm27527-201ENSMUST00000183903 99 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm27233-201ENSMUST00000184030 307 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm38231-201ENSMUST00000192030 347 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm38213-201ENSMUST00000193203 173 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Usp28Q5I043 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm35570-201ENSMUST00000198730 681 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm18645-201ENSMUST00000209593 651 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Usp28Q5I043 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm23452-201ENSMUST00000083327 107 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Usp28Q5I043 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Usp28Q5I043 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
Usp28Q5I043 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm14931-201ENSMUST00000111079 253 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm14897-201ENSMUST00000118213 207 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm14795-201ENSMUST00000118461 471 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm12495-201ENSMUST00000119750 447 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm22478-201ENSMUST00000122570 154 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm26349-201ENSMUST00000157530 130 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm23865-201ENSMUST00000157723 97 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm24240-201ENSMUST00000157785 135 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm17030-201ENSMUST00000167016 393 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm20773-201ENSMUST00000178940 681 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm27786-201ENSMUST00000184337 70 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm7299-201ENSMUST00000194441 581 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm44060-201ENSMUST00000204440 410 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm18602-201ENSMUST00000209794 851 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Usp28Q5I043 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm23297-201ENSMUST00000083184 127 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.05□□□□□ -1.92
Usp28Q5I043 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Usp28Q5I043 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm26341-201ENSMUST00000104561 134 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm9001-201ENSMUST00000121642 399 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm14713-201ENSMUST00000122362 686 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.04□□□□□ -1.92
Usp28Q5I043 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Usp28Q5I043 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm17117-201ENSMUST00000163665 299 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm8338-201ENSMUST00000163928 363 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm17187-201ENSMUST00000164622 410 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm17204-201ENSMUST00000167936 478 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Usp28Q5I043 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm27942-201ENSMUST00000184669 101 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm28466-201ENSMUST00000190678 659 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm44348-201ENSMUST00000200165 122 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm18327-201ENSMUST00000202426 830 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm44903-201ENSMUST00000206840 130 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm45400-201ENSMUST00000211603 653 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.04□□□□□ -1.92
Usp28Q5I043 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms