Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm6112-201ENSMUST00000208037 629 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm45912-201ENSMUST00000210646 543 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm26439-201ENSMUST00000082592 106 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 AF357341-201ENSMUST00000083088 75 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm25582-201ENSMUST00000083412 110 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 BC051076-202ENSMUST00000199477 2868 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm13803-201ENSMUST00000117547 489 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm14987-201ENSMUST00000117820 676 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm15529-201ENSMUST00000121833 994 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm27233-201ENSMUST00000184030 307 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm27428-201ENSMUST00000184289 110 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm20811-201ENSMUST00000190500 553 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm32340-201ENSMUST00000192883 259 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm42438-201ENSMUST00000197832 974 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm8423-201ENSMUST00000211387 607 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm9628-201ENSMUST00000222169 725 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trafd1Q3UDK1 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm7853-201ENSMUST00000100708 478 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm6664-201ENSMUST00000119138 468 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm15452-201ENSMUST00000119877 240 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm11389-201ENSMUST00000121407 430 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm24627-201ENSMUST00000122764 138 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm23032-201ENSMUST00000157995 107 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm26061-201ENSMUST00000175584 108 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm26866-201ENSMUST00000180414 802 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm27374-201ENSMUST00000183660 81 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm18727-201ENSMUST00000185981 553 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm29602-201ENSMUST00000186887 442 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm5731-201ENSMUST00000190969 481 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm29288-201ENSMUST00000191582 901 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm44050-201ENSMUST00000204263 527 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm44600-201ENSMUST00000208540 111 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Gm9818-201ENSMUST00000050900 255 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 AF357428-201ENSMUST00000083815 69 ntBASIC3.09□□□□□ -1.91
Trafd1Q3UDK1 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Trafd1Q3UDK1 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Mir466n-201ENSMUST00000104798 94 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm16431-201ENSMUST00000117454 431 ntBASIC3.08□□□□□ -1.92
Trafd1Q3UDK1 Gm14647-201ENSMUST00000119392 680 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms