Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm27254-201ENSMUST00000183926 517 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm29484-201ENSMUST00000186067 324 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm28661-201ENSMUST00000188231 681 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm31511-201ENSMUST00000193134 657 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm45023-201ENSMUST00000207951 379 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm45590-201ENSMUST00000209715 262 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm18602-201ENSMUST00000209794 851 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm2446-201ENSMUST00000220144 772 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm31849-201ENSMUST00000220306 375 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm17890-201ENSMUST00000221419 757 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm24623-201ENSMUST00000082616 194 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm22423-201ENSMUST00000082861 184 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.84□□□□□ -1.63
Ddb1Q3U1J4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ddb1Q3U1J4 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.84□□□□□ -1.64
Ddb1Q3U1J4 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Ddb1Q3U1J4 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Ddb1Q3U1J4 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ddb1Q3U1J4 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Ddb1Q3U1J4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm24120-201ENSMUST00000103978 129 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm15195-201ENSMUST00000118775 263 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Cfap61-214ENSMUST00000167179 183 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm3851-201ENSMUST00000168653 318 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm24306-201ENSMUST00000180229 79 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Mir7k-201ENSMUST00000184115 110 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm28151-201ENSMUST00000189404 951 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm43494-201ENSMUST00000197672 388 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm43026-201ENSMUST00000202972 325 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm2710-201ENSMUST00000073196 603 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddb1Q3U1J4 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm25407-201ENSMUST00000104102 134 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm23530-201ENSMUST00000104564 137 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm14159-201ENSMUST00000119832 451 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm25784-201ENSMUST00000122524 81 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm26476-201ENSMUST00000122618 313 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm27233-201ENSMUST00000184030 307 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm29104-201ENSMUST00000186304 222 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm28785-201ENSMUST00000187478 379 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm28552-201ENSMUST00000190725 388 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm18291-201ENSMUST00000190791 301 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm37111-201ENSMUST00000193250 634 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm37817-201ENSMUST00000195276 434 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm43652-201ENSMUST00000196219 675 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm43541-201ENSMUST00000197208 581 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm45860-201ENSMUST00000212700 334 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddb1Q3U1J4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm12878-201ENSMUST00000118744 332 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm24060-201ENSMUST00000157494 95 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm22080-201ENSMUST00000157591 106 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm27592-201ENSMUST00000157729 126 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm26045-201ENSMUST00000157862 97 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm8224-201ENSMUST00000166178 497 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm22174-201ENSMUST00000175050 125 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm22692-201ENSMUST00000175055 125 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm27634-201ENSMUST00000175060 126 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms