Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm25860-201ENSMUST00000158252 126 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm22769-201ENSMUST00000158367 98 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm23775-201ENSMUST00000158991 249 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm24819-201ENSMUST00000175094 166 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm23145-201ENSMUST00000178912 79 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm26988-201ENSMUST00000183296 945 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm27773-201ENSMUST00000184087 78 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm19498-201ENSMUST00000191128 331 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm37576-201ENSMUST00000194228 372 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm7380-201ENSMUST00000211599 466 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm45439-201ENSMUST00000211723 359 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm19219-201ENSMUST00000215863 724 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm24622-201ENSMUST00000082619 162 ntBASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ptchd3Q0EEE2 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm12025-201ENSMUST00000117768 144 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm13082-201ENSMUST00000118877 561 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm15014-201ENSMUST00000120742 258 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm25058-201ENSMUST00000157365 128 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm23755-201ENSMUST00000157578 343 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm27592-201ENSMUST00000157729 126 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm23773-201ENSMUST00000158985 296 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm22174-201ENSMUST00000175050 125 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm22692-201ENSMUST00000175055 125 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm27634-201ENSMUST00000175060 126 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm22460-201ENSMUST00000175269 124 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm26141-201ENSMUST00000175299 126 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm25535-201ENSMUST00000175364 125 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm24365-201ENSMUST00000175384 125 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm44310-201ENSMUST00000175424 126 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm22639-201ENSMUST00000175591 125 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm24979-201ENSMUST00000178626 126 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm27743-201ENSMUST00000185136 126 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm44050-201ENSMUST00000204263 527 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm22970-201ENSMUST00000083304 186 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Gm25630-201ENSMUST00000084000 162 ntBASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ptchd3Q0EEE2 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm9157-201ENSMUST00000117673 225 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm15399-201ENSMUST00000118055 724 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm15988-201ENSMUST00000118677 367 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm2318-201ENSMUST00000119623 639 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm2768-201ENSMUST00000121062 250 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm22320-201ENSMUST00000157149 312 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Mir5136-201ENSMUST00000175573 76 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm7438-201ENSMUST00000177664 639 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm7408-201ENSMUST00000178014 639 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm7386-201ENSMUST00000178020 639 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm3657-201ENSMUST00000178170 639 ntBASIC3.16□□□□□ -1.9
Ptchd3Q0EEE2 Gm7415-201ENSMUST00000178205 639 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms