Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm37029-201ENSMUST00000195773 239 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm17954-201ENSMUST00000195893 607 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm45879-201ENSMUST00000212521 392 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm23055-201ENSMUST00000082805 94 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm24235-201ENSMUST00000104319 129 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm7219-201ENSMUST00000119619 297 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm12691-201ENSMUST00000120186 456 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm13511-201ENSMUST00000121167 363 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm26348-201ENSMUST00000157528 240 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm23902-201ENSMUST00000157571 134 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm24965-201ENSMUST00000157922 106 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm22804-201ENSMUST00000158052 101 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm22536-201ENSMUST00000158171 134 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm24546-201ENSMUST00000158652 102 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm26400-201ENSMUST00000175012 85 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm28304-201ENSMUST00000185977 312 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm29256-201ENSMUST00000189094 312 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm28484-201ENSMUST00000190606 312 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm7449-201ENSMUST00000194393 663 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm44474-201ENSMUST00000196525 127 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm7041-201ENSMUST00000201227 524 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm10092-201ENSMUST00000077110 180 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm24166-201ENSMUST00000082724 135 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm25202-201ENSMUST00000082838 191 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col8a1Q00780 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Col8a1Q00780 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Col8a1Q00780 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Col8a1Q00780 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm22269-201ENSMUST00000104002 130 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm24586-201ENSMUST00000116695 89 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm13321-201ENSMUST00000117101 400 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm15844-201ENSMUST00000118016 576 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm14591-201ENSMUST00000120407 518 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm24784-201ENSMUST00000157640 62 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm25749-201ENSMUST00000175485 111 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm25361-201ENSMUST00000179358 76 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm44348-201ENSMUST00000200165 122 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm44816-201ENSMUST00000206666 477 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm45200-201ENSMUST00000207434 919 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm26128-201ENSMUST00000083170 110 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm25818-201ENSMUST00000083282 164 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms