Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cux1P53564 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cux1P53564 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Gm15760-201ENSMUST00000119553 283 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
Cux1P53564 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Gm23980-201ENSMUST00000157135 158 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm24053-201ENSMUST00000158620 105 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Mir7679-201ENSMUST00000183379 63 ntBASIC3.29□□□□□ -1.88
Cux1P53564 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Mir3069-201ENSMUST00000198802 65 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cux1P53564 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cux1P53564 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Gm24098-201ENSMUST00000102075 109 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm25381-201ENSMUST00000102078 109 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm23109-201ENSMUST00000116867 126 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm24907-201ENSMUST00000116932 128 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm14982-201ENSMUST00000121102 442 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm24900-201ENSMUST00000158128 134 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm23385-201ENSMUST00000158592 295 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC3.29□□□□□ -1.88
Cux1P53564 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.29□□□□□ -1.88
Cux1P53564 Mir6353-201ENSMUST00000183596 113 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm28466-201ENSMUST00000190678 659 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm37550-201ENSMUST00000193230 463 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Gm46146-201ENSMUST00000217483 346 ntBASIC3.29□□□□□ -1.88
Cux1P53564 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cux1P53564 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cux1P53564 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cux1P53564 Gm13687-201ENSMUST00000119857 282 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Gm5396-201ENSMUST00000121222 532 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Gm22793-201ENSMUST00000157227 330 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Gm19269-201ENSMUST00000211401 804 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Gm18015-201ENSMUST00000214879 316 ntBASIC3.28□□□□□ -1.88
Cux1P53564 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.28□□□□□ -1.88
Cux1P53564 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.28□□□□□ -1.88
Cux1P53564 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Cux1P53564 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.27□□□□□ -1.89
Cux1P53564 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cux1P53564 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Cux1P53564 Gm24317-201ENSMUST00000178536 107 ntBASIC3.27□□□□□ -1.89
Cux1P53564 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.27□□□□□ -1.89
Cux1P53564 Gm45654-201ENSMUST00000210980 123 ntBASIC3.27□□□□□ -1.89
Cux1P53564 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.27□□□□□ -1.89
Cux1P53564 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Gm12935-201ENSMUST00000119352 246 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.26□□□□□ -1.89
Cux1P53564 Gm26024-201ENSMUST00000158657 322 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Gm37732-201ENSMUST00000194377 316 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cux1P53564 Gm45772-201ENSMUST00000212961 240 ntBASIC3.26□□□□□ -1.89
Cux1P53564 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.26□□□□□ -1.89
Cux1P53564 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cux1P53564 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.26□□□□□ -1.89
Cux1P53564 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cux1P53564 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cux1P53564 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cux1P53564 Gm16328-201ENSMUST00000126985 196 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 Gm26280-201ENSMUST00000157096 101 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Gm25113-201ENSMUST00000157185 143 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Gm23642-201ENSMUST00000157858 258 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Gm16326-201ENSMUST00000162843 414 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Gm8338-201ENSMUST00000163928 363 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Gm7675-201ENSMUST00000208828 686 ntBASIC3.25□□□□□ -1.89
Cux1P53564 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cux1P53564 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cux1P53564 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.25□□□□□ -1.89
Cux1P53564 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cux1P53564 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cux1P53564 Gm3496-201ENSMUST00000188283 745 ntBASIC3.24□□□□□ -1.89
Cux1P53564 Gm44181-201ENSMUST00000203106 483 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms