Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm24831-201ENSMUST00000116778 126 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm14013-201ENSMUST00000119006 270 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm13007-201ENSMUST00000121866 365 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.45□□□□□ -1.54
Rfx1P48377 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm25603-201ENSMUST00000158361 105 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.45□□□□□ -1.54
Rfx1P48377 Mir5103-201ENSMUST00000175111 79 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm5139-201ENSMUST00000175943 249 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm22951-201ENSMUST00000179471 107 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm26828-201ENSMUST00000180640 172 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm5368-201ENSMUST00000189012 589 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm45857-201ENSMUST00000212207 356 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm33654-201ENSMUST00000221704 215 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm21937-201ENSMUST00000222825 218 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rfx1P48377 Gm22423-201ENSMUST00000082861 184 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm22741-201ENSMUST00000083438 165 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.45□□□□□ -1.54
Rfx1P48377 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Rfx1P48377 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.45□□□□□ -1.54
Rfx1P48377 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rfx1P48377 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm23422-201ENSMUST00000102000 107 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 Mir467g-201ENSMUST00000116906 120 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm12311-201ENSMUST00000118803 374 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm13717-201ENSMUST00000119868 365 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm13092-201ENSMUST00000136346 260 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm23779-201ENSMUST00000157938 64 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm17109-201ENSMUST00000163985 358 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm17072-201ENSMUST00000166673 658 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm17162-201ENSMUST00000168538 473 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm27457-201ENSMUST00000184771 156 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm2950-201ENSMUST00000185530 520 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm29330-201ENSMUST00000190032 699 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm37682-201ENSMUST00000191776 522 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm44184-201ENSMUST00000204290 132 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm46327-201ENSMUST00000218240 365 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm46190-201ENSMUST00000219650 427 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.44□□□□□ -1.54
Rfx1P48377 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm23406-201ENSMUST00000082537 122 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.44□□□□□ -1.54
Rfx1P48377 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rfx1P48377 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Gm21035-201ENSMUST00000207867 2608 ntBASIC5.44□□□□□ -1.54
Rfx1P48377 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rfx1P48377 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx1P48377 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Rfx1P48377 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm13550-201ENSMUST00000118185 525 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Rfx1P48377 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm16358-201ENSMUST00000146046 210 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm26102-201ENSMUST00000157251 284 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm25637-201ENSMUST00000157529 107 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm22843-201ENSMUST00000157710 134 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm16545-201ENSMUST00000161968 463 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
Rfx1P48377 Mir6418-201ENSMUST00000185075 115 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.43□□□□□ -1.54
Rfx1P48377 Gm37878-201ENSMUST00000192108 387 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm37416-201ENSMUST00000193596 318 ntBASIC5.43□□□□□ -1.54
Rfx1P48377 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms