Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.25□□□□□ -2.05
HttP42859 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.25□□□□□ -2.05
HttP42859 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
HttP42859 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HttP42859 Gm24237-201ENSMUST00000157790 132 ntBASIC2.24□□□□□ -2.05
HttP42859 Gm37337-201ENSMUST00000192601 993 ntBASIC2.24□□□□□ -2.05
HttP42859 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.24□□□□□ -2.05
HttP42859 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HttP42859 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HttP42859 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
HttP42859 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
HttP42859 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HttP42859 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HttP42859 Mir5128-201ENSMUST00000175217 84 ntBASIC2.24□□□□□ -2.05
HttP42859 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HttP42859 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HttP42859 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.24□□□□□ -2.05
HttP42859 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HttP42859 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HttP42859 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.24□□□□□ -2.05
HttP42859 Gm28149-201ENSMUST00000187102 378 ntBASIC2.24□□□□□ -2.05
HttP42859 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.24□□□□□ -2.05
HttP42859 Gm28768-201ENSMUST00000189034 378 ntBASIC2.24□□□□□ -2.05
HttP42859 Gm43239-201ENSMUST00000200131 201 ntBASIC2.24□□□□□ -2.05
HttP42859 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.23□□□□□ -2.05
HttP42859 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HttP42859 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HttP42859 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.23□□□□□ -2.05
HttP42859 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.23□□□□□ -2.05
HttP42859 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HttP42859 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC2.23□□□□□ -2.05
HttP42859 Gm23708-201ENSMUST00000104367 123 ntBASIC2.23□□□□□ -2.05
HttP42859 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.23□□□□□ -2.05
HttP42859 Gm25976-201ENSMUST00000158695 130 ntBASIC2.23□□□□□ -2.05
HttP42859 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HttP42859 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.23□□□□□ -2.05
HttP42859 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HttP42859 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.22□□□□□ -2.05
HttP42859 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.22□□□□□ -2.05
HttP42859 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.22□□□□□ -2.05
HttP42859 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.22□□□□□ -2.05
HttP42859 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HttP42859 Gm14215-201ENSMUST00000120578 221 ntBASIC2.22□□□□□ -2.05
HttP42859 Olfr844-201ENSMUST00000054106 930 ntBASIC2.22□□□□□ -2.05
HttP42859 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HttP42859 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HttP42859 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC2.22□□□□□ -2.05
HttP42859 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
HttP42859 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HttP42859 Gm6245-201ENSMUST00000164699 768 ntBASIC2.22□□□□□ -2.05
HttP42859 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
HttP42859 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HttP42859 Gm37703-201ENSMUST00000192292 1784 ntBASIC2.22□□□□□ -2.05
HttP42859 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.22□□□□□ -2.05
HttP42859 Gm12090-201ENSMUST00000118692 758 ntBASIC2.22□□□□□ -2.05
HttP42859 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HttP42859 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.22□□□□□ -2.05
HttP42859 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.21□□□□□ -2.06
HttP42859 Snord14e-201ENSMUST00000082857 90 ntBASIC2.21□□□□□ -2.06
HttP42859 Gm26301-201ENSMUST00000104813 95 ntBASIC2.21□□□□□ -2.06
HttP42859 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.21□□□□□ -2.06
HttP42859 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.21□□□□□ -2.06
HttP42859 Gm26029-201ENSMUST00000158659 132 ntBASIC2.21□□□□□ -2.06
HttP42859 Gm2878-201ENSMUST00000170173 486 ntBASIC2.21□□□□□ -2.06
HttP42859 Gm28614-201ENSMUST00000186483 458 ntBASIC2.21□□□□□ -2.06
HttP42859 Gm44521-201ENSMUST00000206469 217 ntBASIC2.21□□□□□ -2.06
HttP42859 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.21□□□□□ -2.06
HttP42859 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.2□□□□□ -2.06
HttP42859 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HttP42859 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.2□□□□□ -2.06
HttP42859 Gm23342-201ENSMUST00000158958 115 ntBASIC2.2□□□□□ -2.06
HttP42859 AC118006.1-201ENSMUST00000224211 501 ntBASIC2.2□□□□□ -2.06
HttP42859 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.2□□□□□ -2.06
HttP42859 Gm18433-201ENSMUST00000192747 197 ntBASIC2.2□□□□□ -2.06
HttP42859 Gm42506-201ENSMUST00000202009 150 ntBASIC2.2□□□□□ -2.06
HttP42859 Gm25051-201ENSMUST00000158602 249 ntBASIC2.2□□□□□ -2.06
HttP42859 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HttP42859 Gm7709-201ENSMUST00000199391 1858 ntBASIC2.19□□□□□ -2.06
HttP42859 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HttP42859 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HttP42859 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.19□□□□□ -2.06
HttP42859 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HttP42859 Gm22517-201ENSMUST00000158265 136 ntBASIC2.19□□□□□ -2.06
HttP42859 Gm23005-201ENSMUST00000158950 136 ntBASIC2.19□□□□□ -2.06
HttP42859 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HttP42859 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HttP42859 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
HttP42859 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HttP42859 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HttP42859 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.19□□□□□ -2.06
HttP42859 Gm37692-201ENSMUST00000192633 232 ntBASIC2.19□□□□□ -2.06
HttP42859 Gm43892-201ENSMUST00000204373 265 ntBASIC2.19□□□□□ -2.06
HttP42859 Gm13340-201ENSMUST00000117219 1545 ntBASIC2.19□□□□□ -2.06
HttP42859 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HttP42859 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
HttP42859 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HttP42859 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HttP42859 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HttP42859 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HttP42859 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms