Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mir467h-201ENSMUST00000116759 121 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Gm14358-201ENSMUST00000118458 403 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Gm9119-201ENSMUST00000118866 495 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm3470-201ENSMUST00000160819 420 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm28466-201ENSMUST00000190678 659 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Traf1P39428 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm10038-201ENSMUST00000077233 441 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm23297-201ENSMUST00000083184 127 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Traf1P39428 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Traf1P39428 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Traf1P39428 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.87□□□□□ -1.79
Traf1P39428 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.86□□□□□ -1.79
Traf1P39428 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Traf1P39428 Gm14469-201ENSMUST00000118363 202 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm14566-201ENSMUST00000118915 321 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm6664-201ENSMUST00000119138 468 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Traf1P39428 Gm26020-201ENSMUST00000122729 183 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm16274-201ENSMUST00000139251 592 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm5958-201ENSMUST00000147698 297 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm24730-201ENSMUST00000158228 117 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm2966-201ENSMUST00000166052 481 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm23415-201ENSMUST00000175519 83 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm26960-201ENSMUST00000182263 412 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.86□□□□□ -1.79
Traf1P39428 Gm29104-201ENSMUST00000186304 222 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.86□□□□□ -1.79
Traf1P39428 Gm42465-201ENSMUST00000197036 492 ntBASIC3.86□□□□□ -1.79
Traf1P39428 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Traf1P39428 Gm17838-201ENSMUST00000205872 876 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm18252-203ENSMUST00000215855 757 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm2544-201ENSMUST00000222702 756 ntBASIC3.86□□□□□ -1.79
Traf1P39428 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Traf1P39428 Gm25792-201ENSMUST00000083289 100 ntBASIC3.86□□□□□ -1.79
Traf1P39428 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Traf1P39428 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Traf1P39428 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Traf1P39428 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.85□□□□□ -1.79
Traf1P39428 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Traf1P39428 Gm24118-201ENSMUST00000103972 126 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Traf1P39428 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.85□□□□□ -1.79
Traf1P39428 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm14506-201ENSMUST00000121165 536 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Traf1P39428 Gm14651-201ENSMUST00000147192 442 ntBASIC3.85□□□□□ -1.79
Traf1P39428 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.85□□□□□ -1.79
Traf1P39428 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.85□□□□□ -1.79
Traf1P39428 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Mir7578-201ENSMUST00000183455 82 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm28412-201ENSMUST00000187243 177 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.85□□□□□ -1.79
Traf1P39428 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm35876-201ENSMUST00000205044 459 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Traf1P39428 Gm7624-201ENSMUST00000209702 435 ntBASIC3.85□□□□□ -1.79
Traf1P39428 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.85□□□□□ -1.79
Traf1P39428 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm9973-202ENSMUST00000220926 166 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Traf1P39428 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.85□□□□□ -1.79
Traf1P39428 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Traf1P39428 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.84□□□□□ -1.79
Traf1P39428 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm25213-201ENSMUST00000102388 113 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Traf1P39428 Gm11253-201ENSMUST00000118486 201 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm15452-201ENSMUST00000119877 240 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm12607-201ENSMUST00000120724 493 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm2005-201ENSMUST00000120759 542 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm15142-201ENSMUST00000121013 856 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm7308-201ENSMUST00000121087 447 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm24138-201ENSMUST00000157572 114 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm3370-201ENSMUST00000171785 500 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Gm26866-201ENSMUST00000180414 802 ntBASIC3.84□□□□□ -1.79
Traf1P39428 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms