Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.79□□□□□ -1.96
P20040 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
P20040 Gm24127-201ENSMUST00000104110 130 ntBASIC2.79□□□□□ -1.96
P20040 Mir291a-201ENSMUST00000104815 82 ntBASIC2.79□□□□□ -1.96
P20040 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
P20040 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.79□□□□□ -1.96
P20040 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.79□□□□□ -1.96
P20040 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.79□□□□□ -1.96
P20040 Gm26020-201ENSMUST00000122729 183 ntBASIC2.79□□□□□ -1.96
P20040 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.79□□□□□ -1.96
P20040 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
P20040 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
P20040 Gm22766-201ENSMUST00000158372 99 ntBASIC2.79□□□□□ -1.96
P20040 Gm25902-201ENSMUST00000158493 318 ntBASIC2.79□□□□□ -1.96
P20040 Gm23028-201ENSMUST00000158773 265 ntBASIC2.79□□□□□ -1.96
P20040 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.79□□□□□ -1.96
P20040 Gm19498-201ENSMUST00000191128 331 ntBASIC2.79□□□□□ -1.96
P20040 Gm37104-201ENSMUST00000193278 196 ntBASIC2.79□□□□□ -1.96
P20040 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.79□□□□□ -1.96
P20040 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
P20040 Gm45912-201ENSMUST00000210646 543 ntBASIC2.79□□□□□ -1.96
P20040 Gm45742-201ENSMUST00000212400 433 ntBASIC2.79□□□□□ -1.96
P20040 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.79□□□□□ -1.96
P20040 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
P20040 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
P20040 Gm9765-201ENSMUST00000043170 321 ntBASIC2.79□□□□□ -1.96
P20040 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
P20040 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
P20040 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
P20040 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
P20040 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
P20040 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
P20040 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
P20040 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
P20040 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
P20040 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
P20040 Gm13046-201ENSMUST00000117391 501 ntBASIC2.78□□□□□ -1.96
P20040 Gm14566-201ENSMUST00000118915 321 ntBASIC2.78□□□□□ -1.96
P20040 Gm23463-201ENSMUST00000122468 99 ntBASIC2.78□□□□□ -1.96
P20040 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.78□□□□□ -1.96
P20040 Gm23473-201ENSMUST00000158883 116 ntBASIC2.78□□□□□ -1.96
P20040 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
P20040 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm27796-201ENSMUST00000183863 261 ntBASIC2.78□□□□□ -1.96
P20040 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
P20040 Gm28438-201ENSMUST00000188299 345 ntBASIC2.78□□□□□ -1.96
P20040 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm38231-201ENSMUST00000192030 347 ntBASIC2.78□□□□□ -1.96
P20040 Gm7142-201ENSMUST00000194232 586 ntBASIC2.78□□□□□ -1.96
P20040 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.78□□□□□ -1.96
P20040 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm43224-201ENSMUST00000201567 898 ntBASIC2.78□□□□□ -1.96
P20040 Gm19177-201ENSMUST00000204520 613 ntBASIC2.78□□□□□ -1.96
P20040 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.78□□□□□ -1.96
P20040 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.78□□□□□ -1.96
P20040 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.78□□□□□ -1.96
P20040 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
P20040 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
P20040 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
P20040 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
P20040 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
P20040 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.77□□□□□ -1.97
P20040 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.77□□□□□ -1.97
P20040 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
P20040 Mir673-201ENSMUST00000102361 91 ntBASIC2.77□□□□□ -1.97
P20040 Gm24118-201ENSMUST00000103972 126 ntBASIC2.77□□□□□ -1.97
P20040 Gm26423-201ENSMUST00000104277 128 ntBASIC2.77□□□□□ -1.97
P20040 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
P20040 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.77□□□□□ -1.97
P20040 Gm22532-201ENSMUST00000158822 140 ntBASIC2.77□□□□□ -1.97
P20040 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.77□□□□□ -1.97
P20040 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.77□□□□□ -1.97
P20040 Gm29452-201ENSMUST00000187996 313 ntBASIC2.77□□□□□ -1.97
P20040 Gm28860-201ENSMUST00000188103 313 ntBASIC2.77□□□□□ -1.97
P20040 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.77□□□□□ -1.97
P20040 Gm29288-201ENSMUST00000191582 901 ntBASIC2.77□□□□□ -1.97
P20040 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.77□□□□□ -1.97
P20040 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
P20040 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
P20040 Gm45023-201ENSMUST00000207951 379 ntBASIC2.77□□□□□ -1.97
P20040 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
P20040 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.77□□□□□ -1.97
P20040 Gm35558-202ENSMUST00000221819 499 ntBASIC2.77□□□□□ -1.97
P20040 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.77□□□□□ -1.97
P20040 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
P20040 Gm4017-201ENSMUST00000084813 338 ntBASIC2.77□□□□□ -1.97
P20040 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.77□□□□□ -1.97
P20040 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
P20040 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
P20040 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.77□□□□□ -1.97
P20040 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
P20040 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
P20040 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.77□□□□□ -1.97
P20040 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms