Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm11430-201ENSMUST00000121317 217 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
Lire1P11260 Gm25391-201ENSMUST00000157342 134 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm24240-201ENSMUST00000157785 135 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm23198-201ENSMUST00000158811 91 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm3025-201ENSMUST00000163454 489 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm17119-201ENSMUST00000163943 280 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm2878-201ENSMUST00000170173 486 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Mir6541-201ENSMUST00000183649 110 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm27828-201ENSMUST00000184108 119 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm27189-201ENSMUST00000184119 190 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Lire1P11260 Gm19637-201ENSMUST00000185933 579 ntBASIC3.41□□□□□ -1.86
Lire1P11260 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Lire1P11260 Gm29452-201ENSMUST00000187996 313 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm28860-201ENSMUST00000188103 313 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.41□□□□□ -1.86
Lire1P11260 Gm32340-201ENSMUST00000192883 259 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm43521-201ENSMUST00000197838 255 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm43107-201ENSMUST00000198729 255 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.41□□□□□ -1.86
Lire1P11260 Gm44294-201ENSMUST00000205090 728 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm45778-201ENSMUST00000211959 153 ntBASIC3.41□□□□□ -1.86
Lire1P11260 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.41□□□□□ -1.86
Lire1P11260 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.41□□□□□ -1.86
Lire1P11260 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.41□□□□□ -1.86
Lire1P11260 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Lire1P11260 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Lire1P11260 Gm23925-201ENSMUST00000082471 132 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm24147-201ENSMUST00000082763 144 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm23723-201ENSMUST00000082996 132 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Gm25481-201ENSMUST00000083221 158 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Mir137-201ENSMUST00000083635 73 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Lire1P11260 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.41□□□□□ -1.86
Lire1P11260 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Lire1P11260 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.41□□□□□ -1.86
Lire1P11260 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Lire1P11260 Gm23175-201ENSMUST00000104371 132 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Lire1P11260 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.4□□□□□ -1.87
Lire1P11260 Gm8260-201ENSMUST00000119230 353 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm7209-201ENSMUST00000122339 333 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lire1P11260 Gm24914-201ENSMUST00000157285 313 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm24086-201ENSMUST00000175171 98 ntBASIC3.4□□□□□ -1.87
Lire1P11260 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Lire1P11260 Gm27648-201ENSMUST00000184315 107 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm7870-201ENSMUST00000184467 616 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm18403-201ENSMUST00000192907 529 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.4□□□□□ -1.87
Lire1P11260 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm44600-201ENSMUST00000208540 111 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm45379-201ENSMUST00000211772 549 ntBASIC3.4□□□□□ -1.87
Lire1P11260 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm46193-201ENSMUST00000219399 364 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm2446-201ENSMUST00000220144 772 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Gm18116-201ENSMUST00000220920 537 ntBASIC3.4□□□□□ -1.87
Lire1P11260 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.4□□□□□ -1.87
Lire1P11260 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.4□□□□□ -1.87
Lire1P11260 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.4□□□□□ -1.87
Lire1P11260 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lire1P11260 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.4□□□□□ -1.87
Lire1P11260 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Lire1P11260 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lire1P11260 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.4□□□□□ -1.87
Lire1P11260 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.4□□□□□ -1.87
Lire1P11260 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Lire1P11260 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lire1P11260 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lire1P11260 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lire1P11260 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lire1P11260 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lire1P11260 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Lire1P11260 Gm3940-201ENSMUST00000105087 432 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm6923-201ENSMUST00000118343 406 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm13831-201ENSMUST00000118764 302 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm12900-201ENSMUST00000120919 573 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm25807-201ENSMUST00000122783 305 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Lire1P11260 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.39□□□□□ -1.87
Lire1P11260 Gm26348-201ENSMUST00000157528 240 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm23084-201ENSMUST00000157850 114 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm23666-201ENSMUST00000158053 116 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lire1P11260 Gm20415-201ENSMUST00000172877 423 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lire1P11260 Gm6625-201ENSMUST00000177870 272 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lire1P11260 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.39□□□□□ -1.87
Lire1P11260 Gm6060-201ENSMUST00000188671 251 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Trbv8-201ENSMUST00000194020 285 ntBASIC3.39□□□□□ -1.87
Lire1P11260 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms