Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.69□□□□□ -1.82
Cbx4O55187 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cbx4O55187 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.68□□□□□ -1.82
Cbx4O55187 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm23271-201ENSMUST00000104052 124 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm25169-201ENSMUST00000104190 129 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm25420-201ENSMUST00000104216 127 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cbx4O55187 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm11600-201ENSMUST00000119592 240 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm26348-201ENSMUST00000157528 240 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm24901-201ENSMUST00000158125 110 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm27952-201ENSMUST00000184748 105 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm8151-201ENSMUST00000184817 871 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.68□□□□□ -1.82
Cbx4O55187 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm37869-201ENSMUST00000193385 595 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm44343-201ENSMUST00000196702 90 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm42818-201ENSMUST00000198869 987 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm43367-201ENSMUST00000199986 625 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm42453-201ENSMUST00000200477 409 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm45232-201ENSMUST00000207811 162 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm44754-201ENSMUST00000208155 400 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm45539-201ENSMUST00000210313 428 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gm20039-201ENSMUST00000210329 394 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cbx4O55187 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cbx4O55187 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Cbx4O55187 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.68□□□□□ -1.82
Cbx4O55187 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cbx4O55187 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Cbx4O55187 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Gm25765-201ENSMUST00000104100 132 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm26418-201ENSMUST00000104275 137 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Gm12878-201ENSMUST00000118744 332 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm7219-201ENSMUST00000119619 297 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm5123-201ENSMUST00000121905 837 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm5755-201ENSMUST00000152394 837 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm23112-201ENSMUST00000158606 125 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm23365-201ENSMUST00000175019 125 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm25960-201ENSMUST00000175110 125 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm44453-201ENSMUST00000175161 126 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm25195-201ENSMUST00000177656 126 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm27161-201ENSMUST00000183960 562 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Mir6715-201ENSMUST00000184990 57 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.67□□□□□ -1.82
Cbx4O55187 Gm38044-201ENSMUST00000192964 487 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm38109-201ENSMUST00000195386 181 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Gm44583-201ENSMUST00000207478 281 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm7407-201ENSMUST00000208301 568 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.67□□□□□ -1.82
Cbx4O55187 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.67□□□□□ -1.82
Cbx4O55187 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cbx4O55187 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cbx4O55187 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cbx4O55187 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cbx4O55187 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cbx4O55187 Gm24951-201ENSMUST00000102182 109 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm24792-201ENSMUST00000104286 128 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Cbx4O55187 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.66□□□□□ -1.82
Cbx4O55187 Gm12492-201ENSMUST00000117665 564 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm14918-201ENSMUST00000118153 268 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm11512-201ENSMUST00000119669 663 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm23463-201ENSMUST00000122468 99 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm17538-201ENSMUST00000168236 327 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm20693-201ENSMUST00000177431 211 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm24968-201ENSMUST00000179817 107 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.66□□□□□ -1.82
Cbx4O55187 Gm10292-201ENSMUST00000183142 581 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cbx4O55187 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.66□□□□□ -1.82
Cbx4O55187 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.66□□□□□ -1.82
Cbx4O55187 Gm44887-201ENSMUST00000208980 178 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms