Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm25339-201ENSMUST00000157458 232 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm22600-201ENSMUST00000157598 269 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm23380-201ENSMUST00000158448 103 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm15508-201ENSMUST00000160330 325 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm20534-201ENSMUST00000172957 172 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Mir3473a-201ENSMUST00000175011 78 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm8649-201ENSMUST00000181799 233 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm28647-201ENSMUST00000188416 197 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm43070-201ENSMUST00000196938 415 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm43932-201ENSMUST00000204499 52 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm2059-201ENSMUST00000212025 287 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.1□□□□□ -2.07
Hmgb3O54879 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hmgb3O54879 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 AC158142.3-201ENSMUST00000226230 675 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm25739-201ENSMUST00000082886 107 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm25199-201ENSMUST00000083095 104 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.1□□□□□ -2.07
Hmgb3O54879 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hmgb3O54879 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hmgb3O54879 Gm12509-201ENSMUST00000118033 609 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm14240-201ENSMUST00000120353 546 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm7071-201ENSMUST00000120458 462 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm14736-201ENSMUST00000121470 336 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm22957-201ENSMUST00000122511 123 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm22225-201ENSMUST00000157358 278 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm24475-201ENSMUST00000157435 143 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm24813-201ENSMUST00000175310 84 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm24757-201ENSMUST00000176987 371 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Npn2-202ENSMUST00000189275 235 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.09□□□□□ -2.07
Hmgb3O54879 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm43626-201ENSMUST00000198575 162 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm35570-201ENSMUST00000198730 681 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm44332-201ENSMUST00000203712 433 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm36776-201ENSMUST00000207006 203 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm44964-201ENSMUST00000207011 273 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm45513-201ENSMUST00000210228 376 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm19232-201ENSMUST00000211621 652 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.09□□□□□ -2.07
Hmgb3O54879 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.09□□□□□ -2.07
Hmgb3O54879 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gm23249-201ENSMUST00000083369 161 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Mir346-201ENSMUST00000083547 98 ntBASIC2.09□□□□□ -2.07
Hmgb3O54879 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Hmgb3O54879 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Hmgb3O54879 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.09□□□□□ -2.08
Hmgb3O54879 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Hmgb3O54879 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Hmgb3O54879 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Hmgb3O54879 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm12392-201ENSMUST00000118014 938 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm14843-201ENSMUST00000119596 212 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm6461-201ENSMUST00000120015 633 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm11829-201ENSMUST00000121003 282 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm24546-201ENSMUST00000158652 102 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Mir3104-201ENSMUST00000174911 63 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm27582-201ENSMUST00000184084 126 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Mir6943-201ENSMUST00000185186 66 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Hmgb3O54879 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm20811-201ENSMUST00000190500 553 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm19030-201ENSMUST00000194947 552 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.08□□□□□ -2.08
Hmgb3O54879 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.08□□□□□ -2.08
Hmgb3O54879 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms