Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm14972-201ENSMUST00000121780 364 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm23169-201ENSMUST00000157157 112 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm22791-201ENSMUST00000157232 145 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm22216-201ENSMUST00000157557 114 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm26187-201ENSMUST00000157693 101 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm22085-201ENSMUST00000158344 110 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm16038-201ENSMUST00000159317 193 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Mir5103-201ENSMUST00000175111 79 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Mir6413-201ENSMUST00000184049 108 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm27477-201ENSMUST00000184649 143 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm6059-201ENSMUST00000196903 340 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm44794-201ENSMUST00000206550 411 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm17989-201ENSMUST00000211543 412 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm9386-201ENSMUST00000095195 381 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm6043-201ENSMUST00000099961 492 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Trim55G3X8Y1 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm12062-201ENSMUST00000117533 259 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm15231-201ENSMUST00000119174 447 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm14694-201ENSMUST00000121856 282 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm11507-201ENSMUST00000156462 412 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm25339-201ENSMUST00000157458 232 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm26460-201ENSMUST00000175061 126 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm26866-201ENSMUST00000180414 802 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm28683-201ENSMUST00000187134 615 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm28840-205ENSMUST00000189320 615 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm28835-203ENSMUST00000190062 615 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm45215-201ENSMUST00000206407 395 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm45252-201ENSMUST00000211579 397 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm45327-201ENSMUST00000211612 565 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm24045-201ENSMUST00000083113 98 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm23972-201ENSMUST00000083322 165 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm23875-201ENSMUST00000083711 318 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Gm22868-201ENSMUST00000083955 164 ntBASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim55G3X8Y1 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Trim55G3X8Y1 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim55G3X8Y1 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.68
Trim55G3X8Y1 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.59□□□□□ -1.68
Trim55G3X8Y1 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Trim55G3X8Y1 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm22021-201ENSMUST00000104353 107 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm16089-201ENSMUST00000117679 336 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm16106-201ENSMUST00000119187 294 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm11262-201ENSMUST00000119326 833 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm14570-201ENSMUST00000119444 391 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm23546-201ENSMUST00000158211 137 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.58□□□□□ -1.68
Trim55G3X8Y1 Gm28976-201ENSMUST00000188070 144 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms