Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm16053-201ENSMUST00000120511 188 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm12155-201ENSMUST00000121267 160 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24914-201ENSMUST00000157285 313 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22390-201ENSMUST00000157588 325 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm25981-201ENSMUST00000157921 295 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24960-201ENSMUST00000157923 90 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24534-201ENSMUST00000157949 291 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm6060-201ENSMUST00000188671 251 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm5268-201ENSMUST00000189212 940 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Mir129b-201ENSMUST00000197461 65 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm19202-201ENSMUST00000198096 808 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44657-201ENSMUST00000208568 450 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm18557-201ENSMUST00000218710 433 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm7422-201ENSMUST00000220115 640 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm31849-201ENSMUST00000220306 375 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm23104-201ENSMUST00000083722 104 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm23102-201ENSMUST00000083724 116 ntBASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav11A0A0B4J1J9 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav11A0A0B4J1J9 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.15□□□□□ -2.06
Trav11A0A0B4J1J9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav11A0A0B4J1J9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav11A0A0B4J1J9 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm15018-201ENSMUST00000117090 633 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm7974-201ENSMUST00000117154 408 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm13751-201ENSMUST00000120280 752 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm12876-201ENSMUST00000120975 408 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26277-201ENSMUST00000157097 152 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm23470-201ENSMUST00000157129 120 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm22961-201ENSMUST00000157964 106 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm24552-201ENSMUST00000158646 103 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26141-201ENSMUST00000175299 126 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm27869-201ENSMUST00000184327 122 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm27520-201ENSMUST00000184872 81 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm28439-201ENSMUST00000187714 876 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm29460-201ENSMUST00000188607 714 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm38075-201ENSMUST00000191979 920 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm37989-201ENSMUST00000195202 803 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43070-201ENSMUST00000196938 415 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm43979-201ENSMUST00000203179 475 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm44927-201ENSMUST00000207573 716 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Gm26128-201ENSMUST00000083170 110 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm23948-201ENSMUST00000104030 132 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm25526-201ENSMUST00000104332 132 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm649-201ENSMUST00000117284 1054 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14681-201ENSMUST00000118047 411 ntBASIC2.14□□□□□ -2.07
Trav11A0A0B4J1J9 Gm14669-201ENSMUST00000118841 250 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms