Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm24553-201ENSMUST00000158653 131 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23028-201ENSMUST00000158773 265 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm22307-201ENSMUST00000180019 107 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm28591-201ENSMUST00000185259 183 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm37523-201ENSMUST00000194901 412 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm45105-201ENSMUST00000207824 397 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm7751-201ENSMUST00000212868 709 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23847-201ENSMUST00000083829 110 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm12492-201ENSMUST00000117665 564 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm2003-201ENSMUST00000118537 636 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14647-201ENSMUST00000119392 680 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm13676-201ENSMUST00000122185 591 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23887-201ENSMUST00000122683 172 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm26020-201ENSMUST00000122729 183 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm1989-201ENSMUST00000126244 636 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm16274-201ENSMUST00000139251 592 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23667-201ENSMUST00000157466 120 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm22416-201ENSMUST00000158590 88 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm25119-201ENSMUST00000158815 88 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm25026-201ENSMUST00000175017 188 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27330-201ENSMUST00000184689 132 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44118-201ENSMUST00000204665 229 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm36776-201ENSMUST00000207006 203 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44824-201ENSMUST00000207021 229 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm18410-201ENSMUST00000207199 577 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm45530-201ENSMUST00000211658 225 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm9845-201ENSMUST00000056409 598 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm24120-201ENSMUST00000103978 129 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm13761-201ENSMUST00000117238 807 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14463-201ENSMUST00000121117 498 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Snrpert-201ENSMUST00000121967 279 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm13194-201ENSMUST00000142299 311 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm20672-201ENSMUST00000176605 261 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm22367-201ENSMUST00000178930 132 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27942-201ENSMUST00000184669 101 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm19498-201ENSMUST00000191128 331 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm29389-201ENSMUST00000191562 352 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm38214-201ENSMUST00000192581 988 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm37993-201ENSMUST00000195301 988 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43384-201ENSMUST00000200569 637 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms