Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm23352-201ENSMUST00000158428 64 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm23112-201ENSMUST00000158606 125 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm10357-201ENSMUST00000159886 264 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm27903-201ENSMUST00000175482 126 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm22120-201ENSMUST00000175590 70 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm23568-201ENSMUST00000177960 92 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm24829-201ENSMUST00000179245 92 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm22917-201ENSMUST00000180116 110 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Mir7031-201ENSMUST00000183860 65 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm29641-201ENSMUST00000188955 259 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm20203-201ENSMUST00000192352 332 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm43114-201ENSMUST00000198298 343 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.17□□□□□ -1.9
H2afb1S4R1E0 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm24120-201ENSMUST00000103978 129 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm9308-201ENSMUST00000119073 448 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm12044-201ENSMUST00000120335 213 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm15177-201ENSMUST00000120491 577 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm15733-201ENSMUST00000132957 242 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm22236-201ENSMUST00000157093 106 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm25883-201ENSMUST00000157781 271 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm22769-201ENSMUST00000158367 98 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm26219-201ENSMUST00000175216 71 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm23799-201ENSMUST00000175559 120 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm18396-201ENSMUST00000177095 361 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm22584-201ENSMUST00000177935 92 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm26177-201ENSMUST00000178683 107 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm24897-201ENSMUST00000179033 107 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm11392-201ENSMUST00000181419 710 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Mir7074-201ENSMUST00000183884 63 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm27648-201ENSMUST00000184315 107 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Mir6914-201ENSMUST00000184999 69 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm29600-201ENSMUST00000188687 377 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm6680-201ENSMUST00000192789 950 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm45553-201ENSMUST00000209929 507 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm20039-201ENSMUST00000210329 394 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm45796-201ENSMUST00000212483 114 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm10038-201ENSMUST00000077233 441 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm25008-201ENSMUST00000083809 81 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC3.16□□□□□ -1.9
H2afb1S4R1E0 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
H2afb1S4R1E0 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H2afb1S4R1E0 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.15□□□□□ -1.9
H2afb1S4R1E0 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H2afb1S4R1E0 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.9
H2afb1S4R1E0 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
H2afb1S4R1E0 Gm23273-201ENSMUST00000104058 135 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm25560-201ENSMUST00000104606 176 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm2318-201ENSMUST00000119623 639 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm14785-201ENSMUST00000120185 539 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm2768-201ENSMUST00000121062 250 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm23212-201ENSMUST00000122718 60 ntBASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.15□□□□□ -1.91
H2afb1S4R1E0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms