Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm25526-201ENSMUST00000104332 132 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Snora36b-201ENSMUST00000104383 132 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm11221-201ENSMUST00000117230 597 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm6461-201ENSMUST00000120015 633 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm11344-201ENSMUST00000122011 335 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm23887-201ENSMUST00000122683 172 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm24314-201ENSMUST00000158274 123 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm24734-201ENSMUST00000158860 262 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Mir6408-201ENSMUST00000183643 91 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm15235-201ENSMUST00000200572 194 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm44520-201ENSMUST00000205447 802 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm19232-201ENSMUST00000211621 652 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm18645-202ENSMUST00000212222 760 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Gm25739-201ENSMUST00000082886 107 ntBASIC2.1□□□□□ -2.07
Trem3Q9JKE1 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trem3Q9JKE1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Mir542-201ENSMUST00000102186 85 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm25308-201ENSMUST00000104171 158 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm12268-201ENSMUST00000118398 442 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm14240-201ENSMUST00000120353 546 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm15037-201ENSMUST00000120358 259 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm14069-201ENSMUST00000120815 229 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm13131-201ENSMUST00000122228 321 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm25107-201ENSMUST00000122472 129 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm23792-201ENSMUST00000122557 93 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm24532-201ENSMUST00000157951 286 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm15974-201ENSMUST00000159103 531 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm20534-201ENSMUST00000172957 172 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm27999-201ENSMUST00000183539 193 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm29534-201ENSMUST00000187328 382 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm6801-201ENSMUST00000190697 339 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm37807-201ENSMUST00000194310 190 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm18748-201ENSMUST00000198507 622 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm44399-201ENSMUST00000205043 226 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm19540-201ENSMUST00000221843 810 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Gm19786-201ENSMUST00000222589 580 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.09□□□□□ -2.07
Trem3Q9JKE1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.09□□□□□ -2.08
Trem3Q9JKE1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Trem3Q9JKE1 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm25280-201ENSMUST00000157269 101 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm22563-201ENSMUST00000157333 269 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm23380-201ENSMUST00000158448 103 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm16236-201ENSMUST00000159588 379 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm20718-201ENSMUST00000176058 259 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm9696-202ENSMUST00000191541 830 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm6140-201ENSMUST00000192494 966 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm38311-201ENSMUST00000192945 165 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Gm44274-201ENSMUST00000203417 256 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.08□□□□□ -2.08
Trem3Q9JKE1 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.08□□□□□ -2.08
Trem3Q9JKE1 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms