Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm44212-201ENSMUST00000205016 897 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.7□□□□□ -2.14
Smco4Q9JIS3 Gm19599-201ENSMUST00000218898 358 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 Gm2436-201ENSMUST00000219562 774 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 AC158536.1-201ENSMUST00000222510 256 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 CT009713.6-201ENSMUST00000223615 294 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 AC147628.1-201ENSMUST00000228193 688 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 Gm23447-201ENSMUST00000082798 163 ntBASIC1.7□□□□□ -2.14
Smco4Q9JIS3 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Smco4Q9JIS3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm13771-201ENSMUST00000117988 238 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm12448-201ENSMUST00000118852 655 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm11881-201ENSMUST00000119408 572 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm7327-201ENSMUST00000120925 652 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm14709-201ENSMUST00000121225 304 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm3370-201ENSMUST00000171785 500 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Mir6971-201ENSMUST00000183497 63 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm29534-201ENSMUST00000187328 382 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm9775-201ENSMUST00000189402 331 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm8249-201ENSMUST00000219225 465 ntBASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Smco4Q9JIS3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm37320-201ENSMUST00000192781 4953 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm24670-201ENSMUST00000104154 132 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm22590-201ENSMUST00000104247 128 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm24792-201ENSMUST00000104286 128 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm25539-201ENSMUST00000116886 122 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm12235-201ENSMUST00000118596 170 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm11943-201ENSMUST00000119473 327 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm5646-201ENSMUST00000120568 714 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm15147-201ENSMUST00000122263 483 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm22093-201ENSMUST00000158980 111 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm13147-202ENSMUST00000177526 1173 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Mir6933-201ENSMUST00000184982 81 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm20039-201ENSMUST00000210329 394 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 AC153870.1-201ENSMUST00000219599 560 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 AC153924.1-201ENSMUST00000220117 312 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm46369-201ENSMUST00000221577 401 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Snord14d-201ENSMUST00000083424 86 ntBASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Smco4Q9JIS3 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Mir682-201ENSMUST00000102281 96 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm12509-201ENSMUST00000118033 609 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm24937-201ENSMUST00000122597 134 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm22322-201ENSMUST00000157151 111 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm17538-201ENSMUST00000168236 327 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Mir6379-201ENSMUST00000183392 115 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm24350-202ENSMUST00000198309 132 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm44824-201ENSMUST00000207021 229 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm9370-201ENSMUST00000222787 609 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 AC154788.1-201ENSMUST00000225003 340 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Smco4Q9JIS3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.67□□□□□ -2.14
Smco4Q9JIS3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm24125-201ENSMUST00000104105 137 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm25308-201ENSMUST00000104171 158 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm14020-201ENSMUST00000118165 662 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm14607-201ENSMUST00000119119 491 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm26701-201ENSMUST00000181571 234 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm38329-201ENSMUST00000193473 427 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm38076-201ENSMUST00000193889 450 ntBASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Smco4Q9JIS3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms