Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm14975-201ENSMUST00000118741 664 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm14292-201ENSMUST00000118761 456 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm13831-201ENSMUST00000118764 302 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm13082-201ENSMUST00000118877 561 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm14785-201ENSMUST00000120185 539 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm12706-201ENSMUST00000121588 698 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm27903-201ENSMUST00000175482 126 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm20693-201ENSMUST00000177431 211 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm22584-201ENSMUST00000177935 92 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm45366-201ENSMUST00000209828 384 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm20304-201ENSMUST00000218168 444 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm25480-201ENSMUST00000083217 133 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm14797-201ENSMUST00000119378 1480 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.03□□□□□ -1.76
Trim54Q9ERP3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim54Q9ERP3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.03□□□□□ -1.77
Trim54Q9ERP3 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm24127-201ENSMUST00000104110 130 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm26387-201ENSMUST00000104238 132 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm12370-201ENSMUST00000117809 604 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm12897-201ENSMUST00000120341 250 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm23702-201ENSMUST00000158840 130 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm17177-201ENSMUST00000169144 483 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm7094-201ENSMUST00000178379 366 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm27952-201ENSMUST00000184748 105 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm28489-201ENSMUST00000186655 316 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Npn2-202ENSMUST00000189275 235 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm17966-201ENSMUST00000193453 594 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm37732-201ENSMUST00000194377 316 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm45173-201ENSMUST00000206819 305 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm18703-201ENSMUST00000215318 333 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 CT010480.5-201ENSMUST00000225026 217 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim54Q9ERP3 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm25088-201ENSMUST00000101803 79 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm12294-201ENSMUST00000119723 490 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm12770-201ENSMUST00000121734 462 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm25784-201ENSMUST00000122524 81 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Gm26171-201ENSMUST00000158422 131 ntBASIC4.01□□□□□ -1.77
Trim54Q9ERP3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms