Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm25598-201ENSMUST00000179031 107 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Mir6386-201ENSMUST00000183558 104 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm29452-201ENSMUST00000187996 313 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm28860-201ENSMUST00000188103 313 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm37281-201ENSMUST00000192412 439 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm18403-201ENSMUST00000192907 529 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm44060-201ENSMUST00000204440 410 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm44865-201ENSMUST00000207240 531 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm44857-201ENSMUST00000208331 196 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm22507-201ENSMUST00000082773 160 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm14880-201ENSMUST00000117581 292 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm12509-201ENSMUST00000118033 609 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm12268-201ENSMUST00000118398 442 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm14159-201ENSMUST00000119832 451 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm24854-201ENSMUST00000158025 98 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm5929-201ENSMUST00000166883 487 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm17204-201ENSMUST00000167936 478 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm25360-201ENSMUST00000178786 191 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm3933-201ENSMUST00000195391 439 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm43991-201ENSMUST00000203751 274 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm23846-201ENSMUST00000083835 107 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC2.68□□□□□ -1.98
Lima1Q9ERG0 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Lima1Q9ERG0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm24127-201ENSMUST00000104110 130 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm24376-201ENSMUST00000104399 127 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm14126-201ENSMUST00000122345 395 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm16533-201ENSMUST00000140035 228 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm24443-201ENSMUST00000157242 132 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm22563-201ENSMUST00000157333 269 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm22839-201ENSMUST00000158436 304 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm21638-201ENSMUST00000179473 836 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Mir7658-201ENSMUST00000184043 57 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm28788-201ENSMUST00000189717 375 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm29558-201ENSMUST00000190134 375 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm29524-201ENSMUST00000190819 699 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm43894-201ENSMUST00000203274 688 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm45247-201ENSMUST00000210757 309 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 AF357428-201ENSMUST00000083815 69 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm23058-201ENSMUST00000093703 107 ntBASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Lima1Q9ERG0 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms