Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm12640-201ENSMUST00000120097 310 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm25908-201ENSMUST00000157624 98 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm26701-201ENSMUST00000181571 234 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm37603-201ENSMUST00000192368 219 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm43440-201ENSMUST00000201957 729 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 AV026068-237ENSMUST00000226075 572 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm10237-201ENSMUST00000078393 273 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Olfr197-201ENSMUST00000080031 926 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Snord42a-201ENSMUST00000082606 65 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Mir128-1-201ENSMUST00000083586 70 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm6177-201ENSMUST00000085589 465 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm12173-201ENSMUST00000117622 273 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm11971-201ENSMUST00000117715 288 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm13085-201ENSMUST00000118356 171 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm14980-201ENSMUST00000121247 736 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm12276-201ENSMUST00000121709 301 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm22479-201ENSMUST00000122566 81 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm17148-201ENSMUST00000164702 249 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm43115-201ENSMUST00000196244 160 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 AC154390.1-201ENSMUST00000225629 277 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.09□□□□□ -1.59
Upf1Q9EPU0 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.09□□□□□ -1.6
Upf1Q9EPU0 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Upf1Q9EPU0 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Upf1Q9EPU0 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Upf1Q9EPU0 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.09□□□□□ -1.6
Upf1Q9EPU0 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Upf1Q9EPU0 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Mir673-201ENSMUST00000102361 91 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm25407-201ENSMUST00000104102 134 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm15151-201ENSMUST00000117106 177 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm14897-201ENSMUST00000118213 207 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm12871-201ENSMUST00000118758 438 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm12719-201ENSMUST00000118859 241 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm15231-201ENSMUST00000119174 447 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm15267-201ENSMUST00000120888 464 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm12893-201ENSMUST00000121732 275 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm24477-201ENSMUST00000157438 103 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm23068-201ENSMUST00000158239 293 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm22242-201ENSMUST00000175224 118 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm37743-201ENSMUST00000194645 376 ntBASIC5.08□□□□□ -1.6
Upf1Q9EPU0 Gm43825-201ENSMUST00000199650 734 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms