Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm15282-201ENSMUST00000117707 300 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm2288-201ENSMUST00000118560 638 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm7071-201ENSMUST00000120458 462 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm22026-201ENSMUST00000122735 281 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm13901-201ENSMUST00000137252 468 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm24787-201ENSMUST00000157380 123 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm23587-201ENSMUST00000157658 84 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm17194-201ENSMUST00000164610 348 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm20534-201ENSMUST00000172957 172 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm19641-201ENSMUST00000188432 417 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm43407-201ENSMUST00000199816 317 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm8209-201ENSMUST00000206386 553 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm18242-201ENSMUST00000218455 542 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdc40Q9DC48 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Cdc40Q9DC48 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm22939-201ENSMUST00000103958 131 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm38076-201ENSMUST00000193889 450 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm43746-201ENSMUST00000200028 317 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm44718-201ENSMUST00000206886 359 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm44964-201ENSMUST00000207011 273 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm19126-201ENSMUST00000207896 509 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm45513-201ENSMUST00000210228 376 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm22249-201ENSMUST00000082485 136 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm22507-201ENSMUST00000082773 160 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cdc40Q9DC48 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm22543-201ENSMUST00000104347 94 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm25539-201ENSMUST00000116886 122 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm9119-201ENSMUST00000118866 495 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm13210-201ENSMUST00000121483 273 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm15065-201ENSMUST00000121699 273 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm24213-201ENSMUST00000158255 258 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm26061-201ENSMUST00000175584 108 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm43967-201ENSMUST00000203787 301 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm18598-201ENSMUST00000207724 597 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm45742-201ENSMUST00000212400 433 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Gm35262-201ENSMUST00000215133 267 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cdc40Q9DC48 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 170.1 ms