Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm7909-201ENSMUST00000182688 614 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Gm28196-201ENSMUST00000187719 640 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Gm37417-201ENSMUST00000195257 454 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Gm43393-201ENSMUST00000200147 194 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Snora23-201ENSMUST00000082517 184 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Gm24446-201ENSMUST00000083982 156 ntBASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc3Q9D6Y1 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Snord14c-201ENSMUST00000101927 86 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Mir499-201ENSMUST00000102357 79 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm23128-201ENSMUST00000104257 132 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm14448-201ENSMUST00000116383 210 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm26247-201ENSMUST00000116702 91 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm15103-201ENSMUST00000119893 871 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm13080-201ENSMUST00000120556 420 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm14562-201ENSMUST00000129885 543 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm26277-201ENSMUST00000157097 152 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm16111-201ENSMUST00000162128 285 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Mir3076-201ENSMUST00000175415 60 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm23128-202ENSMUST00000196578 133 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm23846-201ENSMUST00000083835 107 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.72□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Ccdc3Q9D6Y1 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm25500-201ENSMUST00000104426 123 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm15161-201ENSMUST00000117340 387 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm7123-201ENSMUST00000117647 213 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm9850-201ENSMUST00000117916 227 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm12803-201ENSMUST00000118907 821 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm8260-201ENSMUST00000119230 353 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm24854-201ENSMUST00000158025 98 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm24681-201ENSMUST00000158760 107 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm22500-201ENSMUST00000158982 99 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm9541-201ENSMUST00000188409 502 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43478-201ENSMUST00000200381 292 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm44030-201ENSMUST00000204865 432 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm44208-201ENSMUST00000205199 421 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Ccdc3Q9D6Y1 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm13349-201ENSMUST00000118436 411 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm14008-201ENSMUST00000120483 274 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm16458-201ENSMUST00000121428 502 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm22561-201ENSMUST00000157331 84 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm26000-201ENSMUST00000157991 107 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm28788-201ENSMUST00000189717 375 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29558-201ENSMUST00000190134 375 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm37007-201ENSMUST00000194234 319 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43384-201ENSMUST00000200569 637 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43368-201ENSMUST00000200638 409 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms