Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm25557-201ENSMUST00000158084 315 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm20651-201ENSMUST00000177219 329 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm22252-201ENSMUST00000179316 79 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm25412-201ENSMUST00000180258 107 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Mir7k-201ENSMUST00000184115 110 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm28688-201ENSMUST00000187301 268 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm38329-201ENSMUST00000193473 427 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm44348-201ENSMUST00000200165 122 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm34091-201ENSMUST00000200875 604 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm24611-201ENSMUST00000083272 107 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm22939-201ENSMUST00000103958 131 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm9119-201ENSMUST00000118866 495 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm11835-201ENSMUST00000120635 663 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm12819-201ENSMUST00000122223 629 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm25102-201ENSMUST00000122479 112 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm24627-201ENSMUST00000122764 138 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm29365-201ENSMUST00000189461 699 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Gm38213-201ENSMUST00000193203 173 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm11253-201ENSMUST00000118486 201 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm22718-201ENSMUST00000122701 315 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm16274-201ENSMUST00000139251 592 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm17061-201ENSMUST00000163167 499 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm43897-201ENSMUST00000204019 309 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm30738-201ENSMUST00000221346 502 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm23615-201ENSMUST00000082602 65 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm25699-201ENSMUST00000082896 167 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc39Q9D5Y1 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Gm13443-201ENSMUST00000120770 555 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Gm11229-201ENSMUST00000121993 437 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Gm24787-201ENSMUST00000157380 123 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Gm27477-201ENSMUST00000184649 143 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Gm37438-201ENSMUST00000192813 393 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.61□□□□□ -1.83
Ccdc39Q9D5Y1 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms