Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm24430-201ENSMUST00000104077 104 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm12891-201ENSMUST00000119358 240 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm22320-201ENSMUST00000157149 312 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm23538-201ENSMUST00000157535 101 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm25198-201ENSMUST00000178574 110 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm38154-201ENSMUST00000195444 340 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm44355-201ENSMUST00000200417 104 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm43026-201ENSMUST00000202972 325 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm44294-201ENSMUST00000205090 728 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm45023-201ENSMUST00000207951 379 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm45273-201ENSMUST00000211559 281 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm22304-201ENSMUST00000082688 129 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm23932-201ENSMUST00000082914 107 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm25480-201ENSMUST00000083217 133 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Snord15a-201ENSMUST00000083888 148 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Vps28Q9D1C8 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm25727-201ENSMUST00000104522 131 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm14518-201ENSMUST00000117351 542 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm12492-201ENSMUST00000117665 564 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm15988-201ENSMUST00000118677 367 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm14975-201ENSMUST00000118741 664 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm14101-201ENSMUST00000121502 473 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm14768-201ENSMUST00000122126 678 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm26173-201ENSMUST00000158416 136 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm20534-201ENSMUST00000172957 172 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm28574-201ENSMUST00000185757 699 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm28339-201ENSMUST00000185845 696 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm29062-201ENSMUST00000186032 694 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm28057-201ENSMUST00000186603 615 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm28397-201ENSMUST00000187970 699 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm29576-201ENSMUST00000188020 678 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm28896-201ENSMUST00000188609 696 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm29545-201ENSMUST00000188878 694 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm29366-201ENSMUST00000190481 699 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm28354-201ENSMUST00000190904 678 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm37433-201ENSMUST00000192695 678 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm37441-201ENSMUST00000194430 678 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm38107-201ENSMUST00000194873 696 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm44208-201ENSMUST00000205199 421 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm45048-201ENSMUST00000207058 429 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm23736-201ENSMUST00000082553 75 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Vps28Q9D1C8 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm12268-201ENSMUST00000118398 442 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm15014-201ENSMUST00000120742 258 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm25224-201ENSMUST00000158195 68 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm17064-201ENSMUST00000167690 452 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm18384-201ENSMUST00000195974 808 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm31230-201ENSMUST00000199725 785 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm45245-201ENSMUST00000210082 376 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm19219-201ENSMUST00000215863 724 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.69□□□□□ -1.82
Vps28Q9D1C8 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.69□□□□□ -1.82
Vps28Q9D1C8 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms