Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm14518-201ENSMUST00000117351 542 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm14918-201ENSMUST00000118153 268 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm13155-201ENSMUST00000119277 646 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm11582-201ENSMUST00000121041 236 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm11849-201ENSMUST00000121293 261 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm8178-201ENSMUST00000121570 646 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm8880-201ENSMUST00000121800 454 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm25283-201ENSMUST00000157272 77 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm25341-201ENSMUST00000157461 268 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm25198-201ENSMUST00000178574 110 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm37670-201ENSMUST00000193622 229 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm26228-201ENSMUST00000082512 107 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm25080-201ENSMUST00000082526 107 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm25518-201ENSMUST00000083864 107 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Ddx56Q9D0R4 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm11874-201ENSMUST00000117437 130 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm13803-201ENSMUST00000117547 489 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm12878-201ENSMUST00000118744 332 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm15244-201ENSMUST00000121122 130 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 AA413626-201ENSMUST00000121125 494 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm11384-201ENSMUST00000121376 303 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm25902-201ENSMUST00000158493 318 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm23186-201ENSMUST00000180078 107 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm43708-201ENSMUST00000198857 961 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm42818-201ENSMUST00000198869 987 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Gm23928-201ENSMUST00000082469 145 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Mir383-201ENSMUST00000083523 70 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.37□□□□□ -1.71
Ddx56Q9D0R4 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm12173-201ENSMUST00000117622 273 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm11512-201ENSMUST00000119669 663 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm23789-201ENSMUST00000122536 301 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm22755-201ENSMUST00000157143 100 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm23124-201ENSMUST00000157650 107 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm22516-201ENSMUST00000158266 124 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Cfap61-214ENSMUST00000167179 183 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm23215-201ENSMUST00000178153 121 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm26335-201ENSMUST00000178449 107 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm27317-201ENSMUST00000183533 95 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm28211-201ENSMUST00000190920 315 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm8747-201ENSMUST00000195392 751 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm43855-201ENSMUST00000197462 507 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm45101-201ENSMUST00000208327 232 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm45588-201ENSMUST00000211213 630 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 Gm18696-201ENSMUST00000220103 274 ntBASIC4.36□□□□□ -1.71
Ddx56Q9D0R4 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms